RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CUL1Q13616 776 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 STEAP4Q687X5 459 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 DUPD1Q68J44 220 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 FBXO38Q6PIJ6 1188 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 KMT5CQ86Y97 462 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 CNTN4Q8IWV2 1026 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 RAB42Q8N4Z0 105 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 KLHL6Q8WZ60 621 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 SLC41A2Q96JW4 573 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 PPM1MQ96MI6 270 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 NDNQ99608 321 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 ZPBPQ9BS86 351 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 RAB11FIP5Q9BXF6 653 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 SAYSD1Q9NPB0 183 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 GRHL1Q9NZI5 618 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 ZFATQ9P243 1243 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 SLC39A10Q9ULF5 831 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 NFS1Q9Y697 457 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 RP1L1Q8IWN7 2480 aaPredicted RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 SPTBN1Q01082 2364 aaKnown RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 E7ESA3 106 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 CHRM5P08912 532 aaPredicted RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 EBLN1P0CF75 366 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 ATP1A2P50993 1020 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 RAB28P51157 221 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 PLTPP55058 493 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 HSD11B2P80365 405 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 CAV1Q03135 178 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 ACY1Q03154 408 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 ACSBG2Q5FVE4 666 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 TMTC4Q5T4D3 741 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 ZNF549Q6P9A3 640 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 TRMT10BQ6PF06 316 aaKnown RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 BORAQ6PGQ7 559 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 KIAA0408Q6ZU52 694 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 TAX1BP1Q86VP1 789 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 CCDC25Q86WR0 208 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 RASGRP3Q8IV61 690 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 ADGRF3Q8IZF5 1079 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 CARFQ8N187 725 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 GIMAP7Q8NHV1 300 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 KIF18AQ8NI77 898 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 MAGEC3Q8TD91 643 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 RNF31Q96EP0 1072 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 GPR21Q99679 349 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 AARSD1Q9BTE6 412 aaKnown RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 FANCEQ9HB96 536 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 PLAC1Q9HBJ0 212 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 PDE7BQ9NP56 450 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 FBXO8Q9NRD0 319 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 C1GALT1Q9NS00 363 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 OR6C2Q9NZP2 312 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 GALPQ9UBC7 116 aa14.09□□□□□ -0.15
USP39-206ENST00000448971 TRMT6Q9UJA5 497 aaKnown RBP14.09□□□□□ -0.15
USP39-206ENST00000448971 ESYT3A0FGR9 886 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CTAGE15A4D2H0 777 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 ISM1B1AKI9 464 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP39-206ENST00000448971 MAP3K7O43318 606 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CTAGE8P0CG41 777 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 UGT2B7P16662 529 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 PRDX3P30048 256 aaKnown RBP14.08□□□□□ -0.16
USP39-206ENST00000448971 CCNFP41002 786 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CLCN7P51798 805 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 SLC7A5Q01650 507 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 MGAT5Q09328 741 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 GBX1Q14549 363 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 KLHL38Q2WGJ6 581 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 SPESP1Q6UW49 350 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CTAGE6Q86UF2 777 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 TRIM73Q86UV7 250 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 PPP1R3BQ86XI6 285 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
USP39-206ENST00000448971 CTAGE4Q8IX94 777 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 GPATCH11Q8N954 259 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 CD200R1Q8TD46 325 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 RAD51AP1Q96B01 352 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 SLC30A3Q99726 388 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 KLHL25Q9H0H3 589 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 SEMA5BQ9P283 1151 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 RARRES3Q9UL19 164 aa14.08□□□□□ -0.16
USP39-206ENST00000448971 UTP20O75691 2785 aaKnown RBP14.08□□□□□ -0.16
USP39-206ENST00000448971 CLEC18AA5D8T8 446 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 SLC9B1P1A6NJY1 282 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 RASGRF2O14827 1237 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 RAD1O60671 282 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 STK17BO94768 372 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 C1orf105O95561 183 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 CATP04040 527 aaKnown RBP14.07□□□□□ -0.16
USP39-206ENST00000448971 TPBGLP0DKB5 382 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 ENO3P13929 434 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms