RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PCDHGB7Q9Y5F8 929 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 PCDHA2Q9Y5H9 948 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 PCDH7O60245 1069 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GATBO75879 557 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 VNN1O95497 513 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 VIPP01282 170 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 LINGO3P0C6S8 592 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CD72P21854 359 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 IL1R2P27930 398 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SCNN1AP37088 669 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GRK6P43250 576 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CLCNKBP51801 687 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GPX6P59796 221 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SLC10A7Q0GE19 358 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SCARB2Q14108 478 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KCNJ11Q14654 390 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SYCE2Q6PIF2 218 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 XKR5Q6UX68 686 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ADGRG6Q86SQ4 1221 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SLC22A16Q86VW1 577 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 PHTF2Q8N3S3 785 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 OXR1Q8N573 874 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZBTB8BQ8NAP8 495 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KLHL6Q8WZ60 621 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MFSD1Q9H3U5 465 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 EVA1BQ9NVM1 165 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 THUMPD1Q9NXG2 353 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 RIMKLBQ9ULI2 386 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 COLEC10Q9Y6Z7 277 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ABCC6O95255 1503 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 FGF19O95750 216 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 PRH1P02810 166 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 PIK3CBP42338 1070 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 STXBP1P61764 594 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 HMGCS1Q01581 520 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF404Q494X3 552 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 EIPR1Q53HC9 387 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MSANTD2Q6P1R3 559 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 EPGNQ6UW88 154 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 LBX2Q6XYB7 198 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CAND1Q86VP6 1230 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CIR1Q86X95 450 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ENDOVQ8N8Q3 282 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 C1orf216Q8TAB5 229 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 DPF3Q92784 378 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 IL4I1Q96RQ9 567 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 HAPLN3Q96S86 360 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ELAC1Q9H777 363 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF395Q9H8N7 513 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ANKHQ9HCJ1 492 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZCCHC3Q9NUD5 404 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 UCKL1Q9NWZ5 548 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 STOX2Q9P2F5 926 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CD84Q9UIB8 345 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF639Q9UID6 485 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 LOC100130705A0A1B0GUX0 176 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 A0A1W2PPW3 197 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KLRG2A4D1S0 409 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 TLR4O00206 839 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CCRL2O00421 344 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KDM4BO94953 1096 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 RLN2P04090 185 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 IFI30P13284 250 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 FPR1P21462 350 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 RBM34P42696 430 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CEBPGP53567 150 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 NFKB2Q00653 900 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GANABQ14697 944 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SFT2D3Q587I9 215 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 NIPAL1Q6NVV3 410 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CHST9Q7L1S5 443 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MARCH9Q86YJ5 346 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 FAM110BQ8TC76 370 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CCDC107Q8WV48 283 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KLRG1Q96E93 195 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 RBM18Q96H35 190 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 PTPN18Q99952 460 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZBTB26Q9HCK0 441 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CTPS2Q9NRF8 586 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 FARSBQ9NSD9 589 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 POLR3BQ9NW08 1133 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 OSER1Q9NX31 292 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MARK1Q9P0L2 795 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZDHHC2Q9UIJ5 367 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 PADI3Q9ULW8 664 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 FCF1Q9Y324 198 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 TEX264Q9Y6I9 313 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 M0QX08 132 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 DCLK1O15075 740 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CXCL14O95715 111 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KCNA5P22460 613 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CPN2P22792 545 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 DNAJB1P25685 340 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 LMO2P25791 158 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ACADVLP49748 655 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GBX2P52951 348 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MAB21L1Q13394 359 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 RFTN1Q14699 578 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GPR33Q49SQ1 333 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms