RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CRHR1P34998 444 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 BDKRB1P46663 353 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 CCT5P48643 541 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 EPHA4P54764 986 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 SQSTM1Q13501 440 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TSNQ15631 228 aaKnown RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 PPP1R3AQ16821 1122 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 PERM1Q5SV97 790 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 KLC3Q6P597 504 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 SBSNQ6UWP8 590 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 LCA5Q86VQ0 697 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 AMIGO1Q86WK6 493 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 GPSM1Q86YR5 675 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 SRRM1Q8IYB3 904 aaKnown RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TMEM151AQ8N4L1 468 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 DEFB124Q8NES8 71 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 OR9A1PQ8NGU1 263 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 RHEBL1Q8TAI7 183 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 JPH3Q8WXH2 748 aaPredicted RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 ITPKCQ96DU7 683 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 HIST1H2AHQ96KK5 128 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 CCDC138Q96M89 665 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 RUFY1Q96T51 708 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 NRTNQ99748 197 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 HIST1H2AJQ99878 128 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 CCDC3Q9BQI4 270 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 H2AFJQ9BTM1 129 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 HGH1Q9BTY7 390 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 MENTQ9BUN1 341 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TBC1D10AQ9BXI6 508 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TRIM54Q9BYV2 358 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 CENPHQ9H3R5 247 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 SRMSQ9H3Y6 488 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 XKR8Q9H6D3 395 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 ALG9Q9H6U8 611 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 RDH14Q9HBH5 336 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TMBIM4Q9HC24 238 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 PCMTD2Q9NV79 361 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 CIDEBQ9UHD4 219 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 LNPEPQ9UIQ6 1025 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 RNF112Q9ULX5 631 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 PLAGL1Q9UM63 463 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 ICKQ9UPZ9 632 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 OARD1Q9Y530 152 aa7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 ARHGEF17Q96PE2 2063 aaPredicted RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 ASCC3Q8N3C0 2202 aaKnown RBP7.32□□□□□ -1.24
AC004540.1-206ENST00000448056 TP53BP1Q12888 1972 aaPredicted RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 IGHV1OR21-1A0A087WYE8 117 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 KRT87PA6NCN2 255 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 OR6C74A6NCV1 312 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 GOLGA6L10A6NI86 522 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 DYNC1I1O14576 645 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CASC3O15234 703 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 KERAO60938 352 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SASH3O75995 380 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 UBXN7O94888 489 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 GUCA1CO95843 209 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SLC16A8O95907 504 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SYF2O95926 243 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TOP3BO95985 862 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 RBP1P09455 135 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CEACAM1P13688 526 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CREB1P16220 341 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TYRP1P17643 537 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 AMD1P17707 334 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SHMT2P34897 504 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 HSD17B2P37059 387 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 GLRBP48167 497 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ACADVLP49748 655 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 RAB28P51157 221 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 AP1S2P56377 157 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 WDR4P57081 412 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CCL7P80098 99 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 GPLD1P80108 840 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CDKL1Q00532 357 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 E2F1Q01094 437 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CFHR1Q03591 330 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ILKQ13418 452 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ARHGAP19Q14CB8 494 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TGFBIQ15582 683 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CYP2A13Q16696 494 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TSNAXIP1Q2TAA8 658 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 AMZ1Q400G9 498 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CDKL4Q5MAI5 379 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 NKAIN2Q5VXU1 208 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ANKS6Q68DC2 871 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CDHR3Q6ZTQ4 885 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 USP53Q70EK8 1073 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SPRED1Q7Z699 444 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ADAMTSL2Q86TH1 951 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 EXOC3L1Q86VI1 746 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ADGRF3Q8IZF5 1079 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 C4orf33Q8N1A6 199 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 RAB42Q8N4Z0 105 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 BANPQ8N9N5 519 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms