RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 POP5Q969H6 163 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC47A1Q96FL8 570 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 OR52B2Q96RD2 323 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC29A3Q9BZD2 475 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 OSBPL7Q9BZF2 842 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 RERGLQ9H628 205 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 POLR1BQ9H9Y6 1135 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 MCM3APO60318 1980 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SPIBQ01892 262 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 HNRNPA1L2Q32P51 320 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF678Q5SXM1 525 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 GCNT6Q5T4J0 391 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 RSPO2Q6UXX9 243 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 EIF3MQ7L2H7 374 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 GPR141Q7Z602 305 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 NUDT13Q86X67 352 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SPPL2CQ8IUH8 684 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PRSS58Q8IYP2 241 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 LPGAT1Q92604 370 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 DUSP26Q9BV47 211 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 FNDC11Q9BVV2 318 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 FBRSQ9HAH7 460 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 FZD3Q9NPG1 666 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SEC14L3Q9UDX4 400 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 GTF2A1LQ9UNN4 478 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SAMD4AQ9UPU9 718 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 LRCH1Q9Y2L9 728 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PCDHB11Q9Y5F2 797 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 GON4LQ3T8J9 2241 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ZCWPW2A0A1B0GU75 182 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 FAM234BA2RU67 622 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 MAGEB17A8MXT2 336 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC35E2BP0CK96 405 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 IMPDH2P12268 514 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CD1DP15813 335 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 HOXD9P28356 352 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 HLA-FP30511 346 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 AVPR1BP47901 424 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CDKN2DP55273 166 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 HKDC1Q2TB90 917 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC9B2Q86UD5 537 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 C1orf52Q8N6N3 182 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 BTN2A2Q8WVV5 523 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC5A11Q8WWX8 675 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ISG20Q96AZ6 181 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 RGMAQ96B86 450 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PHF21AQ96BD5 680 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ROPN1LQ96C74 230 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CNOT6Q9ULM6 557 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 RNF11Q9Y3C5 154 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 NPIPB15A6NHN6 443 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 H3BNH8 94 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 NDUFS4O43181 175 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ERI3O43414 337 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CLPTM1O96005 669 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 EBLN1P0CF75 366 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PRSS56P0CW18 603 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 IDH2P48735 452 aaKnown RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF155Q12901 538 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC13A2Q13183 592 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ADRM1Q16186 407 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ZIK1Q3SY52 487 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 LACTB2Q53H82 288 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 TMIGD1Q6UXZ0 262 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 FAM13CQ8NE31 585 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 KHSRPQ92945 711 aaKnown RBP eCLIP7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CMTM7Q96FZ5 175 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ANKRD27Q96NW4 1050 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PLEKHG4BQ96PX9 1271 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 OLFM1Q99784 485 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 TMEM245Q9H330 911 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ALG2Q9H553 416 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ANKHQ9HCJ1 492 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SNX7Q9UNH6 387 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CCL26Q9Y258 94 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 MANBAO00462 879 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 PDPK1O15530 556 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 HSMCR30P0CW71 290 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 ITGAXP20702 1163 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 PAICSP22234 425 aaKnown RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 PTX3P26022 381 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 SLC6A11P48066 632 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 ARCN1P48444 511 aaKnown RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 DNAJB13P59910 316 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 PRR5P85299 388 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 DPY19L1Q2PZI1 675 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 TECRLQ5HYJ1 363 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 AAGABQ6PD74 315 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 CHMP1BQ7LBR1 199 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 C11orf65Q8NCR3 313 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 NT5C3BQ969T7 300 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 ZBED6CLQ96FA7 236 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 RMND5BQ96G75 393 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 SLC17A9Q9BYT1 436 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 TPSD1Q9BZJ3 242 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 CRISPLD1Q9H336 500 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 MRTO4Q9UKD2 239 aaKnown RBP7.22□□□□□ -1.25
SYNE1-213ENST00000448038 DGKBQ9Y6T7 804 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 A0A0U1RQS6 177 aa7.22□□□□□ -1.25
SYNE1-213ENST00000448038 KLKB1P03952 638 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms