RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 IFT172Q9UG01 1749 aa4.18□□□□□ -1.74
HMGB3P6-201ENST00000444896 ABCA6Q8N139 1617 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYO3AQ8NEV4 1616 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZC3H13Q5T200 1668 aaKnown RBP4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 A0A1W2PPQ1 181 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 OR6C76A6NM76 312 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 A8MXE2 369 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 ERVV-2B6SEH9 535 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 TRIM77I1YAP6 450 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLC22A2O15244 555 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 LINC01565O15544 149 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLC22A3O75751 556 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLCO2B1O94956 709 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 C22orf31O95567 290 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 NR3C1P04150 777 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 EPHA2P29317 976 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 B3GALT5-AS1P59052 145 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 IRX6P78412 446 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLC27A1Q6PCB7 646 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 USP43Q70EL4 1123 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 TMPRSS11BQ86T26 416 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 COMMD2Q86X83 199 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 DCUN1D3Q8IWE4 304 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 ARHGAP24Q8N264 748 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 TRIML1Q8N9V2 468 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 XXYLT1Q8NBI6 393 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 OR13J1Q8NGT2 312 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 LRRC8CQ8TDW0 803 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 GRHL3Q8TE85 626 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 HSD17B8Q92506 261 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLAMF9Q96A28 289 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 STAMBPL1Q96FJ0 436 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLC47A1Q96FL8 570 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 PGLYRP2Q96PD5 576 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 OR10A4Q9H209 315 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 CCDC177Q9NQR7 707 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 FAM118AQ9NWS6 357 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 BCCIPQ9P287 314 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 B3GAT1Q9P2W7 334 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 IL17BQ9UHF5 180 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 OSGIN1Q9UJX0 560 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 KNSTRNQ9Y448 316 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 BLMP54132 1417 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 SETBP1Q9Y6X0 1596 aa4.17□□□□□ -1.74
HMGB3P6-201ENST00000444896 MROH2AA6NES4 1674 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 ASXL1Q8IXJ9 1541 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 PIK3C2GO75747 1445 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 EDDM13A0A1B0GTR0 161 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 DUXAA6NLW8 204 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 HSP90AA1P07900 732 aaKnown RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYBL1P10243 752 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 MPZP25189 248 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 SLC9A3P48764 834 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 CSE1LP55060 971 aaKnown RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 RPS18P62269 152 aaKnown RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 PHEXP78562 749 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 DMPKQ09013 629 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 HSPB3Q12988 150 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 VWC2Q2TAL6 325 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZC2HC1CQ53FD0 456 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 CORO6Q6QEF8 472 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 TRMT1LQ7Z2T5 733 aaKnown RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 IQCHQ86VS3 1027 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZNF843Q8N446 348 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 IRGQQ8WZA9 623 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZNF524Q96C55 264 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 SENP5Q96HI0 755 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 UHRF2Q96PU4 802 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYADMQ96S97 322 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 RTP3Q9BQQ7 232 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 TRAF4Q9BUZ4 470 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 PANK3Q9H999 370 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYNNQ9NPC7 610 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 GIMAP2Q9UG22 337 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 CCL27Q9Y4X3 112 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 RPS6KL1Q9Y6S9 549 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 CAMSAP1Q5T5Y3 1602 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 NRXN1Q9ULB1 1477 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 RNF123Q5XPI4 1314 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYOM1P52179 1685 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 ABCC3O15438 1527 aa4.16□□□□□ -1.74
HMGB3P6-201ENST00000444896 NPC1L1Q9UHC9 1359 aa4.15□□□□□ -1.74
HMGB3P6-201ENST00000444896 FRMPD1Q5SYB0 1578 aa4.15□□□□□ -1.74
HMGB3P6-201ENST00000444896 UGGT1Q9NYU2 1555 aa4.15□□□□□ -1.74
HMGB3P6-201ENST00000444896 A0A1W2PRB8 838 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 GAPDHSO14556 408 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 PTGESO14684 152 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 MEIS2O14770 477 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 CELF2O95319 508 aaKnown RBP4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 FYNP06241 537 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 FRMD6-AS1P0C7T7 363 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 SMIM18P0DKX4 95 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 LIFP15018 202 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 GNAZP19086 355 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 CYP11B2P19099 503 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 CDH11P55287 796 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 CX3CL1P78423 397 aa4.15□□□□□ -1.75
HMGB3P6-201ENST00000444896 LGALS3BPQ08380 585 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms