RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ATG10Q9H0Y0 220 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 IL1RL2Q9HB29 575 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 GPR89AB7ZAQ6 455 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 K7ESM1 405 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 NME4O00746 187 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 IL6P05231 212 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 GPR89BP0CG08 455 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 ITPKAP23677 461 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 DRD3P35462 400 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
SNX13-204ENST00000444712 EEFSECP57772 596 aaKnown RBP15.25■□□□□ 0.03
SNX13-204ENST00000444712 HMGCS1Q01581 520 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 SGO1Q5FBB7 561 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 FRG2Q64ET8 278 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 SDE2Q6IQ49 451 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 FAM156AQ8NDB6 213 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 DNAJB8Q8NHS0 232 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 VPS33AQ96AX1 596 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 METTL2AQ96IZ6 378 aaKnown RBP15.25■□□□□ 0.03
SNX13-204ENST00000444712 NECTIN4Q96NY8 510 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 FRG2BQ96QU4 278 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 SLC39A3Q9BRY0 314 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 ACPTQ9BZG2 426 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 ITM2CQ9NQX7 267 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 FARSBQ9NSD9 589 aaKnown RBP15.25■□□□□ 0.03
SNX13-204ENST00000444712 ZNHIT2Q9UHR6 403 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 PCDHA9Q9Y5H5 950 aa15.25■□□□□ 0.03
SNX13-204ENST00000444712 DNMT3AQ9Y6K1 912 aaPredicted RBP15.25■□□□□ 0.03
SNX13-204ENST00000444712 MGAT4DA6NG13 374 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 C9JVG2 144 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 MID1O15344 667 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 C1orf105O95561 183 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 HSD3B1P14060 373 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 HSD3B2P26439 372 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 IL12AP29459 219 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 MSX2P35548 267 aaPredicted RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 BDKRB1P46663 353 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 C10orf62Q5T681 223 aaPredicted RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 AGBL4Q5VU57 503 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 PNCKQ6P2M8 343 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 UNC5DQ6UXZ4 953 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TRIM74Q86UV6 250 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 LIX1Q8N485 282 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 ECSITQ9BQ95 431 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 CHD9Q3L8U1 2897 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 PRSS51A0A1B0GVH4 220 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TCRBV3S1A0A5B6 114 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 ASPDHA6ND91 283 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 AQP12BA6NM10 295 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 POP7O75817 140 aaKnown RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 PCDH8O95206 1070 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 ZNF8P17098 575 aaPredicted RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 IMPA1P29218 277 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 GALK1P51570 392 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 NAE1Q13564 534 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 ADGRE1Q14246 886 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 STARD3Q14849 445 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TRIP10Q15642 601 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 AASDHQ4L235 1098 aaPredicted RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 USP39Q53GS9 565 aaKnown RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 XKR6Q5GH73 641 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 PAGE3Q5JUK9 113 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 HABP4Q5JVS0 413 aaKnown RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 C6orf10Q5SRN2 563 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 GRHL2Q6ISB3 625 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 IZUMO2Q6UXV1 221 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TRMT11Q7Z4G4 463 aaKnown RBP15.24■□□□□ 0.03
SNX13-204ENST00000444712 HID1Q8IV36 788 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 AQP12AQ8IXF9 295 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TMEM125Q96AQ2 219 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 MED8Q96G25 268 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 PKP4Q99569 1192 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 ACTL8Q9H568 366 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 AP3M1Q9Y2T2 418 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 KCNE2Q9Y6J6 123 aa15.24■□□□□ 0.03
SNX13-204ENST00000444712 TRPM6Q9BX84 2022 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 KCNH1O95259 989 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 PDHA2P29803 388 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 RPS14P62263 151 aaKnown RBP15.23■□□□□ 0.03
SNX13-204ENST00000444712 CAPN13Q6MZZ7 669 aaPredicted RBP15.23■□□□□ 0.03
SNX13-204ENST00000444712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.23■□□□□ 0.03
SNX13-204ENST00000444712 RNF111Q6ZNA4 994 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 LRRTM4Q86VH4 590 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 AADATQ8N5Z0 425 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 LILRA3Q8N6C8 439 aaPredicted RBP15.23■□□□□ 0.03
SNX13-204ENST00000444712 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 REPS1Q96D71 796 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 INTS7Q9NVH2 962 aaKnown RBP15.23■□□□□ 0.03
SNX13-204ENST00000444712 CMTM6Q9NX76 183 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 ACTR3BQ9P1U1 418 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 PCDHGA11Q9Y5H2 935 aa15.23■□□□□ 0.03
SNX13-204ENST00000444712 H0YIV9 168 aa15.22■□□□□ 0.03
SNX13-204ENST00000444712 SLC16A8O95907 504 aa15.22■□□□□ 0.03
SNX13-204ENST00000444712 RPN2P04844 631 aa15.22■□□□□ 0.03
SNX13-204ENST00000444712 SLC7A1P30825 629 aa15.22■□□□□ 0.03
SNX13-204ENST00000444712 CASP2P42575 452 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms