RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 A0A1W2PPV9 198 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 FANCGO15287 622 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 PHF2O75151 1096 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CNOT3O75175 753 aaKnown RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 NDUFS3O75489 264 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 C1orf105O95561 183 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 S1PR4O95977 384 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 APOA4P06727 396 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ATXN8OSP0DMR3 200 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 SFTPCP11686 197 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ITGAXP20702 1163 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CYP2A7P20853 494 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 PTGIRP43119 386 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 GCGRP47871 477 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 RAB28P51157 221 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 PMS2P54278 862 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 GNG11P61952 73 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 PLOD1Q02809 727 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 SLC5A12Q1EHB4 618 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ANKRD20A4Q4UJ75 823 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ACSBG2Q5FVE4 666 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 C1orf189Q5VU69 101 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 FCRL6Q6DN72 434 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF549Q6P9A3 640 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CNSTQ6PJW8 725 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CILP2Q8IUL8 1156 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 DCUN1D3Q8IWE4 304 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 DENND6AQ8IWF6 608 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 OR2L8Q8NGY9 312 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 GIMAP7Q8NHV1 300 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 C9orf43Q8TAL5 461 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ACTRT1Q8TDG2 376 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 GRK7Q8WTQ7 553 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF669Q96BR6 464 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 SIGLEC10Q96LC7 697 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 GPR87Q9BY21 358 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CHRNA10Q9GZZ6 450 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 SYNPO2LQ9H987 977 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 FANCEQ9HB96 536 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 DHCR7Q9UBM7 475 aaKnown RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 TLK1Q9UKI8 766 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 SNX12Q9UMY4 172 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 MAN2B2Q9Y2E5 1009 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 HEMK1Q9Y5R4 338 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-203ENST00000444440 CPAMD8Q8IZJ3 1885 aa10.47□□□□□ -0.73
SF3A1-203ENST00000444440 NBASA2RRP1 2371 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 SETXQ7Z333 2677 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 FAM237BA0A1B0GVD1 139 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 E7EQ34 232 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 RASGRF2O14827 1237 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 KLF7O75840 302 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 MED26O95402 600 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 RECKO95980 971 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 OGNP20774 298 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 CD9P21926 228 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 MCM3P25205 808 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 PPARGP37231 505 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 GRIA3P42263 894 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 TLE1Q04724 770 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 CTBP1Q13363 440 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 DHX34Q14147 1143 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 FASTKQ14296 549 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 KIR2DS3Q14952 304 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 RNASEH2BQ5TBB1 312 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 CASC4Q6P4E1 433 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 ATG14Q6ZNE5 492 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 OTOAQ7RTW8 1153 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 SYVN1Q86TM6 617 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 ZBTB2Q8N680 514 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF655Q8N720 491 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 MCUQ8NE86 351 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 TCTN2Q96GX1 697 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 GBP5Q96PP8 586 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 PANX3Q96QZ0 392 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 TSSK1BQ9BXA7 367 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 NLNQ9BYT8 704 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 DDX47Q9H0S4 455 aaKnown RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 SYTL2Q9HCH5 934 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 FBXO6Q9NRD1 293 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-203ENST00000444440 SLC22A11Q9NSA0 550 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 SERTAD3Q9UJW9 196 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 TCFL5Q9UL49 500 aa10.46□□□□□ -0.73
SF3A1-203ENST00000444440 ARGFXA6NJG6 315 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 ARHGEF33A8MVX0 844 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 F8W8V4 182 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MASP2O00187 686 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 CTSVO60911 334 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 RFPL1O75677 317 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 OR2B3O76000 313 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 WISP1O95388 367 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MATN4O95460 622 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 KLK3P07288 261 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 RAB40ALP0C0E4 278 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MLNP12872 115 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 IVDP26440 423 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 SLC1A2P43004 574 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms