RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SLC20A1Q8WUM9 679 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 SLC35F5Q8WV83 523 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 SSMEM1Q8WWF3 244 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 WBP2Q969T9 261 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 C16orf58Q96GQ5 468 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 DDX50Q9BQ39 737 aaKnown RBP5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 WDR77Q9BQA1 342 aaPredicted RBP5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 FAM213AQ9BRX8 229 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 TRMOQ9BU70 441 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 TM6SF1Q9BZW5 370 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 RAB33BQ9H082 229 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 DDX47Q9H0S4 455 aaKnown RBP5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 MAP6D1Q9H9H5 199 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 TM9SF3Q9HD45 589 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 PPANQ9NQ55 473 aaKnown RBP5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 GPR173Q9NS66 373 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 TMEM51Q9NW97 253 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 NPAP1Q9NZP6 1156 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 FAM153AQ9UHL3 310 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 KLK4Q9Y5K2 254 aa5.03□□□□□ -1.6
TM9SF3-202ENST00000443638 TMEM110-MUSTN1A8MSY1 372 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 HSPA12AO43301 675 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 HSF2BPO75031 334 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 GSRP00390 522 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 CHRNB2P17787 502 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 PIK3R1P27986 724 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 BDKRB2P30411 391 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 AKT2P31751 481 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 PTGER3P43115 390 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 RPL21P46778 160 aaKnown RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 C21orf58P58505 322 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 DSC1Q08554 894 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 OVGP1Q12889 678 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 MRPL28Q13084 256 aaKnown RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 RIPK1Q13546 671 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SMTNL2Q2TAL5 461 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SYT14P1Q58G82 188 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 GCNT6Q5T4J0 391 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 PRAMEF7Q5VXH5 474 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ZNF770Q6IQ21 691 aaPredicted RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ZNF585AQ6P3V2 769 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 CCDC73Q6ZRK6 1079 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ZNF573Q86YE8 665 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 LAX1Q8IWV1 398 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 DSELQ8IZU8 1212 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ARHGAP24Q8N264 748 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 RNF148Q8N7C7 305 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 KIAA0895Q8NCT3 520 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 DQX1Q8TE96 717 aaKnown RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SAP25Q8TEE9 199 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 TRIB2Q92519 343 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 THRSPQ92748 146 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ESAMQ96AP7 390 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 CCDC51Q96ER9 411 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 STAMBPL1Q96FJ0 436 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SLC38A3Q99624 504 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SPAG8Q99932 426 aaPredicted RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 SLC2A11Q9BYW1 496 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 POLR1EQ9GZS1 481 aaKnown RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 FOXP1Q9H334 677 aaPredicted RBP5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 Q9H8V8 135 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 PIGVQ9NUD9 493 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 LRWD1Q9UFC0 647 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 CDC14AQ9UNH5 594 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 NCAPD2Q15021 1401 aa5.02□□□□□ -1.61
TM9SF3-202ENST00000443638 ADAMTS20P59510 1910 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 TRAV24A0A0B4J272 114 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 FAM230AA0A1W2PPH8 454 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 TMEM129A0AVI4 362 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 MACROD2A1Z1Q3 448 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 DENND3A2RUS2 1198 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 TRIM49BA6NDI0 452 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 KCNU1A8MYU2 1149 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 CHADO15335 359 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 LDB2O43679 373 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 LANCL1O43813 399 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 ZIC3O60481 467 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 ZNF821O75541 412 aaPredicted RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 WDPCPO95876 746 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 MOCS2O96007 188 aaPredicted RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 THRBP10828 461 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 GNLYP22749 145 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 GLRA2P23416 452 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 DHPSP49366 369 aaPredicted RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 RARRES1P49788 294 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 METAP1P53582 386 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 BEX3Q00994 111 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 NHLH1Q02575 133 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 CETN1Q12798 172 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 PPP1R8Q12972 351 aaKnown RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 IL24Q13007 206 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 GIT2Q14161 759 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 GK2Q14410 553 aaPredicted RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 ZKSCAN8Q15776 578 aaPredicted RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 AGAP6Q5VW22 663 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 PAPD7Q5XG87 772 aaKnown RBP5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 CES3Q6UWW8 571 aa5.01□□□□□ -1.61
TM9SF3-202ENST00000443638 ARSKQ6UWY0 536 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms