RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RNF11Q9Y3C5 154 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 POLR3HQ9Y535 204 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 GPR45Q9Y5Y3 372 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 HEBP2Q9Y5Z4 205 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 A0A088AWK7 358 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 A8MUI8 341 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PLXNA2O75051 1894 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 C1orf105O95561 183 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 BMP1P13497 986 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ACPPP15309 386 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PRDX3P30048 256 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 SERPINB1P30740 379 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 LTBRP36941 435 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 GDF5P43026 501 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 MTTPP55157 894 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SLC34A1Q06495 639 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 BNIP2Q12982 314 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 FLOT2Q14254 428 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 RCN1Q15293 331 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PDE4DIPQ5VU43 2346 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 GRHL2Q6ISB3 625 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 MED27Q6P2C8 311 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 CYP20A1Q6UW02 462 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 TRIM46Q7Z4K8 759 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 VRK3Q8IV63 474 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SPNS2Q8IVW8 549 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 IL17RCQ8NAC3 791 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 OR56A3Q8NH54 315 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 FAM3CQ92520 227 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 FOXJ1Q92949 421 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SH3KBP1Q96B97 665 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 CCDC124Q96CT7 223 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 CDK15Q96Q40 435 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PKP4Q99569 1192 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 NPAS2Q99743 824 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 TUBB1Q9H4B7 451 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SGK2Q9HBY8 427 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 LIMD1Q9UGP4 676 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SLC22A14Q9Y267 594 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 KIAA1549LQ6ZVL6 1849 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 A0A1W2PP18 115 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 C2CD4DB7Z1M9 353 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 MBTPS2O43462 519 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PRMT3O60678 531 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PDE5AO76074 875 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 CCNDBP1O95273 360 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SOD1P00441 154 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 HOXC4P09017 264 aaPredicted RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 HTR6P50406 440 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 KIAA1024LP59773 190 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 TRAP1Q12931 704 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 AASDHQ4L235 1098 aaPredicted RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 BLOC1S3Q6QNY0 202 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 MBOAT1Q6ZNC8 495 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SFTPA1Q8IWL2 248 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SFRP1Q8N474 314 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SLC44A3Q8N4M1 653 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 CATSPER1Q8NEC5 780 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 TNIP2Q8NFZ5 429 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 OR2T34Q8NGX1 318 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SLC26A7Q8TE54 656 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 TFGQ92734 400 aaPredicted RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 USP7Q93009 1102 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 POP5Q969H6 163 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 CENPKQ9BS16 269 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 C1orf50Q9BV19 199 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 BTBD1Q9H0C5 482 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 STX18Q9P2W9 335 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 SUCOQ9UBS9 1254 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 MMP17Q9ULZ9 603 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 RUVBL1Q9Y265 456 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 TMEM98Q9Y2Y6 226 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PRRC2BQ5JSZ5 2229 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 MUC22E2RYF6 1773 aaPredicted RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 KANSL1LA0AUZ9 987 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 H0Y3Z8 333 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 H3BQ06 376 aaPredicted RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 MAP3K7O43318 606 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 BAG2O95816 211 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ALDOCP09972 364 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 NDUFS1P28331 727 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 RPL3P39023 403 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 VHLP40337 213 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ASMTP46597 345 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 NME5P56597 212 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ACSM2AQ08AH3 577 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ABRAXAS2Q15018 415 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 DPY19L1Q2PZI1 675 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 ACSM2BQ68CK6 577 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SYNPOQ8N3V7 929 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SMPDL3AQ92484 453 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SHDQ96IW2 340 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 PRPF18Q99633 342 aaKnown RBP5.86□□□□□ -1.47
VPS50-205ENST00000441602 APOOQ9BUR5 198 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 OSGEPL1Q9H4B0 414 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 EHD1Q9H4M9 534 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms