RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TINAGQ9UJW2 476 aa10.72□□□□□ -0.69
CSTF3-203ENST00000438862 SHOC2Q9UQ13 582 aa10.72□□□□□ -0.69
CSTF3-203ENST00000438862 MRPS2Q9Y399 296 aaKnown RBP10.72□□□□□ -0.69
CSTF3-203ENST00000438862 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
CSTF3-203ENST00000438862 HS3ST3B1Q9Y662 390 aa10.72□□□□□ -0.69
CSTF3-203ENST00000438862 ABCA4P78363 2273 aa10.72□□□□□ -0.69
CSTF3-203ENST00000438862 C17orf113A0A1B0GUU1 675 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 C2orf74A8MZ97 194 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 ZSCAN9O15535 394 aaPredicted RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 USP1O94782 785 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 MLYCDO95822 493 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 ONECUT2O95948 504 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 PYGMP11217 842 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 ITGAXP20702 1163 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 FDXRP22570 491 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 CCNCP24863 283 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 MSNP26038 577 aaKnown RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 PCOLCEQ15113 449 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 ATP13A5Q4VNC0 1218 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 KRTCAP3Q53RY4 240 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 LDLRAP1Q5SW96 308 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 HOOK3Q86VS8 718 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 TMEM200AQ86VY9 491 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 TMEM151BQ8IW70 566 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 SYCE1Q8N0S2 351 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 RASGEF1AQ8N9B8 481 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 OR11G2Q8NGC1 345 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 SUN3Q8TAQ9 357 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 CCDC110Q8TBZ0 833 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 DENND1AQ8TEH3 1009 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 THAP3Q8WTV1 239 aaPredicted RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 PHF10Q8WUB8 498 aaKnown RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 MAGED4Q96JG8 741 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
CSTF3-203ENST00000438862 PYCARDQ9ULZ3 195 aa10.71□□□□□ -0.69
CSTF3-203ENST00000438862 MGAT4DA6NG13 374 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 BTN3A3O00478 584 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 PRAMEF2O60811 474 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 PROSCO94903 275 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSTF3-203ENST00000438862 HPP00738 406 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 SLC35G4P0C7Q5 338 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 PVRP15151 417 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 IGFBP2P18065 325 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 UGT1A4P22310 534 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ALAS2P22557 587 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 PCK1P35558 622 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 CTSCP53634 463 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 RBBP7Q16576 425 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 NKG7Q16617 165 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 KBTBD2Q8IY47 623 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 EID3Q8N140 333 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ZNF655Q8N720 491 aaPredicted RBP10.7□□□□□ -0.7
CSTF3-203ENST00000438862 DNAAF3Q8N9W5 541 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 TRIM58Q8NG06 486 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 DLG3Q92796 817 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 TSGA13Q96PP4 275 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ZNF559Q9BR84 538 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 CCM2Q9BSQ5 444 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 KLHL25Q9H0H3 589 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 SLC26A1Q9H2B4 701 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 TFB2MQ9H5Q4 396 aaKnown RBP10.7□□□□□ -0.7
CSTF3-203ENST00000438862 SLC24A3Q9HC58 644 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 FAM60AQ9NP50 221 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 SLC22A11Q9NSA0 550 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 CCM2LQ9NUG4 571 aaPredicted RBP10.7□□□□□ -0.7
CSTF3-203ENST00000438862 PLA2G3Q9NZ20 509 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 COQ3Q9NZJ6 369 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ANAPC7Q9UJX3 599 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 NXT1Q9UKK6 140 aaKnown RBP10.7□□□□□ -0.7
CSTF3-203ENST00000438862 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 ZNF711Q9Y462 761 aa10.7□□□□□ -0.7
CSTF3-203ENST00000438862 OR2AG2A6NM03 316 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 BTN3A1O00481 513 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 HLA-DQB2P05538 268 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 MMP2P08253 660 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 SOX11P35716 441 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 CD86P42081 329 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 GABRA4P48169 554 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 ARSFP54793 590 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 CACNG1Q06432 222 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 GALNT2Q10471 571 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 LRRC38Q5VT99 294 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 ZDHHC20Q5W0Z9 365 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 C19orf47Q8N9M1 422 aaKnown RBP10.69□□□□□ -0.7
CSTF3-203ENST00000438862 OR2L2Q8NH16 312 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 PSMF1Q92530 271 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 ALS2CR12Q96Q35 445 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 RNF32Q9H0A6 362 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 LZTFL1Q9NQ48 299 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 PTGFRNQ9P2B2 879 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 KCNN3Q9UGI6 736 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 GUCA1BQ9UMX6 200 aa10.69□□□□□ -0.7
CSTF3-203ENST00000438862 DUSP10Q9Y6W6 482 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms