RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ROPN1LQ96C74 230 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 PPCDCQ96CD2 204 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 SIPA1Q96FS4 1042 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 NLNQ9BYT8 704 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CEP44Q9C0F1 390 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 WDR26Q9H7D7 661 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZDHHC7Q9NXF8 308 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 FBXL12Q9NXK8 326 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ENTPD4Q9Y227 616 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 VILLO15195 856 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 PI15O43692 258 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 HS6ST1O60243 411 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 GUCY1B2O75343 617 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TFAP2AP05549 437 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ANXA6P08133 673 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CBSLP0DN79 551 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 HLA-FP30511 346 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CBSP35520 551 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 SSR2P43308 183 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 HNMTP50135 292 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 PGM2L1Q6PCE3 622 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CRTC1Q6UUV9 634 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CHSY3Q70JA7 882 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRIG1Q96JA1 1093 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 RHBGQ9H310 441 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ALG2Q9H553 416 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 PSME2Q9UL46 239 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TTC3P53804 2025 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 NPIPB15A6NHN6 443 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TOR1BO14657 336 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TSC22D2O75157 780 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 NDUFS2O75306 463 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PRPS2P11908 318 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PFKLP17858 780 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 XRCC1P18887 633 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PCSK6P29122 969 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 SERPINB10P48595 397 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPINT3P49223 89 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 UBXN2BQ14CS0 331 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 HERC3Q15034 1050 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PNPT1Q8TCS8 783 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PRKAB1Q9Y478 270 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 CEBPBP17676 345 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 EFNA1P20827 205 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 ALDH4A1P30038 563 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 MTHFRP42898 656 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPESP1Q6UW49 350 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 CD300LGQ6UXG3 332 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR2T34Q8NGX1 318 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 C12orf66Q96MD2 445 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 IGSF5Q9NSI5 407 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 CFAP20Q9Y6A4 193 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 DNAJA2O60884 412 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 AMD1P17707 334 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 TNK2Q07912 1038 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 NR1D2Q14995 579 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PTPRRQ15256 657 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF648Q5T619 568 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC13A3Q8WWT9 602 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PTERQ96BW5 349 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 ABCB10Q9NRK6 738 aa11.3□□□□□ -0.6
TRAPPC9-202ENST00000438773 LOC100506127A0A0U1RQW1 187 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 H3BSA7 217 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 KAT7O95251 611 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RASGRP1O95267 797 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 YAP1P46937 504 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 DGKQP52824 942 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 NR1H2P55055 460 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 DIO3P55073 304 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR8H2Q8N162 312 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CAPSLQ8WWF8 208 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADGRE2Q9UHX3 823 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 MAGEL2Q9UJ55 1249 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms