RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 IGFBPL1Q8WX77 278 aa10.48□□□□□ -0.73
RTN4-211ENST00000438462 SPATA16Q9BXB7 569 aa10.48□□□□□ -0.73
RTN4-211ENST00000438462 GTPBP4Q9BZE4 634 aaKnown RBP10.48□□□□□ -0.73
RTN4-211ENST00000438462 WWP1Q9H0M0 922 aa10.48□□□□□ -0.73
RTN4-211ENST00000438462 ZNF700Q9H0M5 742 aa10.48□□□□□ -0.73
RTN4-211ENST00000438462 C2orf74A8MZ97 194 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 SIAH2O43255 324 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 EPB41P11171 864 aaKnown RBP10.47□□□□□ -0.73
RTN4-211ENST00000438462 VSX2P58304 361 aaPredicted RBP10.47□□□□□ -0.73
RTN4-211ENST00000438462 FANCCQ00597 558 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 RFTN1Q14699 578 aaPredicted RBP10.47□□□□□ -0.73
RTN4-211ENST00000438462 ALS2CLQ60I27 953 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 FIGLAQ6QHK4 219 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 SPESP1Q6UW49 350 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 ARHGAP36Q6ZRI8 547 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 BRAPQ7Z569 592 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 NDUFAF2Q8N183 169 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 RFLNBQ8N5W9 214 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 NAXEQ8NCW5 288 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
RTN4-211ENST00000438462 CREB3L4Q8TEY5 395 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 TMEM171Q8WVE6 324 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 LCN9Q8WX39 176 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 GLYATL1Q969I3 302 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 IMMP1LQ96LU5 166 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 KREMEN1Q96MU8 473 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 NUDCD1Q96RS6 583 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 SMC6Q96SB8 1091 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 SLC39A8Q9C0K1 460 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 DEFB127Q9H1M4 99 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 CUTCQ9NTM9 273 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 ACTR10Q9NZ32 417 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 ZNF282Q9UDV7 671 aaPredicted RBP10.47□□□□□ -0.73
RTN4-211ENST00000438462 CNTN6Q9UQ52 1028 aa10.47□□□□□ -0.73
RTN4-211ENST00000438462 HEATR5AQ86XA9 2040 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 FAM170AA1A519 330 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 HSPB2A8KAH6 182 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 BCKDKO14874 412 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 IGFBP5P24593 272 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 EMP2P54851 167 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 OCRLQ01968 901 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 SLC10A7Q0GE19 358 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 HSPB2Q16082 182 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 C15orf59Q2T9L4 293 aaPredicted RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 CCDC38Q502W7 563 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 ZNF468Q5VIY5 522 aaPredicted RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 H3F3CQ6NXT2 135 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 AMZ2Q86W34 360 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 RAVER1Q8IY67 606 aaKnown RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 GRAMD1CQ8IYS0 662 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 PGBD5Q8N414 524 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 IQUBQ8NA54 791 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 C16orf52Q8NHV5 167 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 DENND1AQ8TEH3 1009 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.46□□□□□ -0.736e-7■□□□□ 11.1
RTN4-211ENST00000438462 TUBB6Q9BUF5 446 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 UPF2Q9HAU5 1272 aaKnown RBP10.46□□□□□ -0.73
RTN4-211ENST00000438462 MAGEF1Q9HAY2 307 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 PLCL2Q9UPR0 1127 aa10.46□□□□□ -0.73
RTN4-211ENST00000438462 EML6Q6ZMW3 1958 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 LOC102723996A0A087X1L8 192 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 C1orf232A0A0U1RR37 186 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 ARHGAP42A6NI28 874 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 GAPDHSO14556 408 aaPredicted RBP10.45□□□□□ -0.74
RTN4-211ENST00000438462 CASKO14936 926 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 WDR1O75083 606 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 VENTXO95231 258 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 MT-CYBP00156 380 aaPredicted RBP10.45□□□□□ -0.74
RTN4-211ENST00000438462 MCM3P25205 808 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 PBLDP30039 288 aaPredicted RBP10.45□□□□□ -0.74
RTN4-211ENST00000438462 SNX16P57768 344 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 MAXP61244 160 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 APBA1Q02410 837 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 GCNT1Q02742 428 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 SQLEQ14534 574 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 TMEM249Q2WGJ8 235 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 BTBD16Q32M84 506 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 ABHD17CQ6PCB6 329 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 PAOXQ6QHF9 649 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 PLEKHM3Q6ZWE6 761 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 DAAM2Q86T65 1068 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 DNAJC22Q8N4W6 341 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 ACVR1CQ8NER5 493 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 CHRNA10Q9GZZ6 450 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 KCNK13Q9HB14 408 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 EURLQ9NYK6 297 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 DNPEPQ9ULA0 475 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 SNRNP200O75643 2136 aaKnown RBP10.45□□□□□ -0.74
RTN4-211ENST00000438462 KIAA1549Q9HCM3 1950 aa10.45□□□□□ -0.74
RTN4-211ENST00000438462 OR14I1A6ND48 311 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 FZD6O60353 706 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 KCNJ13O60928 360 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 SEC24DO94855 1032 aaPredicted RBP10.44□□□□□ -0.74
RTN4-211ENST00000438462 NDUFS1P28331 727 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 GTF2H3Q13889 308 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms