RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 UMODP07911 640 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 STIP1P31948 543 aaKnown RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 TNNT3P45378 269 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 TERF1P54274 439 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 PRKD1Q15139 912 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 NOMO1Q15155 1222 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 SLC14A2Q15849 920 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 MRPL14Q6P1L8 145 aaKnown RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 CCDC137Q6PK04 289 aaKnown RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 IGFL2Q6UWQ7 119 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 BNC2Q6ZN30 1099 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 MRGPRGQ86SM5 289 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 CFAP206Q8IYR0 622 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 TADA1Q96BN2 335 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 SPRTNQ9H040 489 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-201ENST00000437737 IL17CQ9P0M4 197 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 PCYOX1Q9UHG3 505 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 CCDC168Q8NDH2 2452 aa13.57□□□□□ -0.24
LINC01088-201ENST00000437737 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 FAM187AA6NFU0 413 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ZSCAN9O15535 394 aaPredicted RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 BUD23O43709 281 aaKnown RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 LIASO43766 372 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 GAS8O95995 478 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 MCM3P25205 808 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 EIF3EP60228 445 aaKnown RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 C2orf54Q08AI8 447 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 PDK1Q15118 436 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 NKAIN1Q4KMZ8 207 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 C8orf74Q6P047 294 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 TMEM151BQ8IW70 566 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 KLHL7Q8IXQ5 586 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ZNF808Q8N4W9 903 aaPredicted RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 SLC25A41Q8N5S1 370 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 LILRA3Q8N6C8 439 aaPredicted RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ZNF655Q8N720 491 aaPredicted RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 C19orf47Q8N9M1 422 aaKnown RBP13.56□□□□□ -0.24
LINC01088-201ENST00000437737 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ACTL9Q8TC94 416 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 SLCO2A1Q92959 643 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 CCDC120Q96HB5 630 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 KRT12Q99456 494 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 NRTNQ99748 197 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 GLOD4Q9HC38 313 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 FAM60AQ9NP50 221 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 SMOXQ9NWM0 555 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ACTR10Q9NZ32 417 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 ZNF148Q9UQR1 794 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 PKP3Q9Y446 797 aa13.56□□□□□ -0.24
LINC01088-201ENST00000437737 IFRD1O00458 451 aaPredicted RBP13.55□□□□□ -0.24
LINC01088-201ENST00000437737 CCL21O00585 134 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
LINC01088-201ENST00000437737 MMP11P24347 488 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 DR1Q01658 176 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 SPESP1Q6UW49 350 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 GFRALQ6UXV0 394 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 LINC00696Q6ZRV3 163 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 GSTA5Q7RTV2 222 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
LINC01088-201ENST00000437737 OR52E1Q8NGJ3 308 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 SLC35B2Q8TB61 432 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 ZNF398Q8TD17 642 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC01088-201ENST00000437737 NDC1Q9BTX1 674 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 TRIM8Q9BZR9 551 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 LHPPQ9H008 270 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 XKR8Q9H6D3 395 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 HACD3Q9P035 362 aa13.55□□□□□ -0.24
LINC01088-201ENST00000437737 UTP11Q9Y3A2 253 aaKnown RBP13.55□□□□□ -0.24
LINC01088-201ENST00000437737 H7C0C1 242 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 GAPDHSO14556 408 aaPredicted RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 NDC80O14777 642 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 PCDH17O14917 1159 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 HCRTR1O43613 425 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 STK10O94804 968 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 RBP3P10745 1247 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 CHRNA4P43681 627 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 ATP5OP48047 213 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 SNX1Q13596 522 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 BCL7AQ4VC05 210 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 SIRPB2Q5JXA9 342 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 RPUSD3Q6P087 351 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 MTFR2Q6P444 385 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 TLDC1Q6P9B6 456 aa13.54□□□□□ -0.24
LINC01088-201ENST00000437737 DARS2Q6PI48 645 aaKnown RBP13.54□□□□□ -0.24
LINC01088-201ENST00000437737 ISLR2Q6UXK2 745 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms