RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ARFIP1P53367 373 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 C8orf4Q9NR00 106 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 KLRF1Q9NZS2 232 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 RGS17Q9UGC6 210 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 A0A087WXM4 84 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 PLIN3O60664 434 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 MED26O95402 600 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 PAK4O96013 591 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 PIK3CBP42338 1070 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 KLHL26Q53HC5 615 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 C14orf80Q86SX3 495 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 CCDC103Q8IW40 242 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 HERPUD2Q9BSE4 406 aa15.28■□□□□ 0.04
NEDD4-202ENST00000435532 SPRTNQ9H040 489 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 MKKSQ9NPJ1 570 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-202ENST00000435532 PIP5K1BO14986 540 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 RYKP34925 604 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 CXCL12P48061 93 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 DECR1Q16698 335 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 MTERF1Q99551 399 aaKnown RBP15.27■□□□□ 0.04
NEDD4-202ENST00000435532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.27■□□□□ 0.04
NEDD4-202ENST00000435532 ACTL8Q9H568 366 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 Q9N2J8 555 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 FAM234BA2RU67 622 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 TTC34A8MYJ7 566 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 MATN2O00339 956 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 SCDO00767 359 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 HEATR4Q86WZ0 1026 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 UMODL1-AS1Q8N2C9 162 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 NXPE1Q8N323 547 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 FIBINQ8TAL6 211 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 NEUROD4Q9HD90 331 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 ZNF624Q9P2J8 865 aaPredicted RBP15.27■□□□□ 0.04
NEDD4-202ENST00000435532 BTAF1O14981 1849 aa15.27■□□□□ 0.04
NEDD4-202ENST00000435532 TRPM3Q9HCF6 1732 aaPredicted RBP15.27■□□□□ 0.04
NEDD4-202ENST00000435532 TMX2-CTNND1H3BSU7 103 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PSMG1O95456 288 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ATP6V1G2O95670 118 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 HBQ1P09105 142 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 POLR2CP19387 275 aaPredicted RBP15.27■□□□□ 0.03
NEDD4-202ENST00000435532 NOVP48745 357 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 TRAF3Q13114 568 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ZNF460Q14592 562 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 DGUOKQ16854 277 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 DPY19L3Q6ZPD9 716 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 IZUMO1Q8IYV9 350 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 OR2AJ1Q8NGZ0 328 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 SLC13A3Q8WWT9 602 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PLEKHG4BQ96PX9 1271 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 HIST1H2AAQ96QV6 131 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 XYLT2Q9H1B5 865 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 IMPDH1P20839 514 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PRPS1L1P21108 318 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 STAT5AP42229 794 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 FAM81AQ8TBF8 368 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 GLYATL1Q969I3 302 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PNPLA2Q96AD5 504 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 NPAS2Q99743 824 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 BCL2L14Q9BZR8 327 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 METTL7AQ9H8H3 244 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 LGALS13Q9UHV8 139 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ELOA3DA6NLF2 546 aaPredicted RBP15.27■□□□□ 0.03
NEDD4-202ENST00000435532 UGT2B11O75310 529 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ELOA3BQ3SY89 546 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ZNF311Q5JNZ3 666 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ARMC4Q5T2S8 1044 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 TMPRSS11AQ6ZMR5 421 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 BNIPLQ7Z465 357 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ALYREFQ86V81 257 aaKnown RBP15.27■□□□□ 0.03
NEDD4-202ENST00000435532 CNTD1Q8N815 330 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 MRPL43Q8N983 215 aaKnown RBP15.27■□□□□ 0.03
NEDD4-202ENST00000435532 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 ELOA3Q8NG57 546 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PSKH2Q96QS6 385 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 RNF121Q9H920 327 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 FTSJ1Q9UET6 329 aa15.27■□□□□ 0.03
NEDD4-202ENST00000435532 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.03
NEDD4-202ENST00000435532 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 ZNF726A6NNF4 738 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 G3V2T6 193 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 CLEC3AO75596 197 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 TCEA1P23193 301 aaKnown RBP15.26■□□□□ 0.03
NEDD4-202ENST00000435532 CXCR1P25024 350 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 AQP1P29972 269 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 GLYATQ6IB77 296 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 PPM1MQ96MI6 270 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 WDR55Q9H6Y2 383 aaPredicted RBP15.26■□□□□ 0.03
NEDD4-202ENST00000435532 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
NEDD4-202ENST00000435532 CCNB1IP1Q9NPC3 277 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 ECI2O75521 394 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 PRDX6P30041 224 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 DLG1Q12959 904 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 KLF10Q13118 480 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 FASTKD3Q14CZ7 662 aaKnown RBP15.26■□□□□ 0.03
NEDD4-202ENST00000435532 PLXDC1Q8IUK5 500 aa15.26■□□□□ 0.03
NEDD4-202ENST00000435532 TMEM40Q8WWA1 233 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms