RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CCNYL3P0C7X3 344 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 MPC1LP0DKB6 136 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 PVRP15151 417 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 ZNF28P17035 718 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 PEBP1P30086 187 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 STAT5AP42229 794 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 SKIV2L2P42285 1042 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 BDKRB1P46663 353 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 CARSP49589 748 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 MRPS25P82663 173 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 CAV1Q03135 178 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 SRSF6Q13247 344 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 TRIM73Q86UV7 250 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 LINC01555Q8NAE3 123 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 GALNT6Q8NCL4 622 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 FBXO36Q8NEA4 188 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 FLVCR1-AS1Q8TAF5 88 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 IL17FQ96PD4 163 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 GPR21Q99679 349 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 SLC30A3Q99726 388 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 WDR83Q9BRX9 315 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 TAS2R13Q9NYV9 303 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 SPATA7Q9P0W8 599 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 CIDEBQ9UHD4 219 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 TRMT6Q9UJA5 497 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 TSR3Q9UJK0 312 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 RALYQ9UKM9 306 aaKnown RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 CORO1CQ9ULV4 474 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-207ENST00000435455 MED16Q9Y2X0 877 aa15.7■□□□□ 0.1
SMPD4-207ENST00000435455 SEC16AO15027 2179 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 LOC101059948A0A1B0GTJ6 334 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 TMEM150CB9EJG8 249 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 KIF2AO00139 706 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-207ENST00000435455 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMPD4-207ENST00000435455 CPNE3O75131 537 aaKnown RBP15.69■□□□□ 0.1
SMPD4-207ENST00000435455 SCRG1O75711 98 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 TIAF1O95411 115 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 AHSGP02765 367 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 LIFP15018 202 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 MGAT5Q09328 741 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 WHAMMP3Q1A5X7 153 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 TEDDM1Q5T9Z0 273 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 LRRC8EQ6NSJ5 796 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 TMEM126BQ8IUX1 230 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 GIMAP7Q8NHV1 300 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 HMGCLL1Q8TB92 370 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 CD200R1Q8TD46 325 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 N4BP2L2Q92802 583 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-207ENST00000435455 SLC45A3Q96JT2 553 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 KLHL25Q9H0H3 589 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 INTS7Q9NVH2 962 aaKnown RBP15.69■□□□□ 0.1
SMPD4-207ENST00000435455 ZFATQ9P243 1243 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 SERTAD3Q9UJW9 196 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 PADI1Q9ULC6 663 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 PCDHB3Q9Y5E6 796 aa15.69■□□□□ 0.1
SMPD4-207ENST00000435455 PIEZO2Q9H5I5 2752 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ZNF891A8MT65 544 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ARHGEF33A8MVX0 844 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ERVH48-1M5A8F1 160 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 WT1P19544 449 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 CYP2A7P20853 494 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 GABRB3P28472 473 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 RGS4P49798 205 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ITGA1P56199 1179 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 CUL1Q13616 776 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 FASTKD3Q14CZ7 662 aaKnown RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 CYP2A13Q16696 494 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 TRMT10BQ6PF06 316 aaKnown RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 CDHR3Q6ZTQ4 885 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ZBED8Q8IZ13 594 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 C2orf73Q8N5S3 287 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 FBXO15Q8NCQ5 510 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 LSM14AQ8ND56 463 aaKnown RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 OR9A1PQ8NGU1 263 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ASB11Q8WXH4 323 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ZNF592Q92610 1267 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 TRIM44Q96DX7 344 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-207ENST00000435455 WBP1Q96G27 269 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 PHACTR1Q9C0D0 580 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
SMPD4-207ENST00000435455 ZNF839A8K0R7 811 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 MYO1CO00159 1063 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 NTRK1P04629 796 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 ERGP11308 486 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 MCM3P25205 808 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
SMPD4-207ENST00000435455 HSD17B2P37059 387 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 MC1RQ01726 317 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 ILF2Q12905 390 aaKnown RBP15.67■□□□□ 0.1
SMPD4-207ENST00000435455 ARHGAP19Q14CB8 494 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 SF1Q15637 639 aaKnown RBP15.67■□□□□ 0.1
SMPD4-207ENST00000435455 ZIC1Q15915 447 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 CCSMST1Q4G0I0 132 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 KIAA1614Q5VZ46 1190 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 TAX1BP1Q86VP1 789 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 CPNE9Q8IYJ1 553 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 GPR135Q8IZ08 494 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 LMNTD1Q8N9Z9 388 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 OR1L3Q8NH93 324 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 DENND1AQ8TEH3 1009 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms