RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CAPN13Q6MZZ7 669 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MSRB3Q8IXL7 192 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MED30Q96HR3 178 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 PPP1R2P1Q96PQ5 205 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SMIM14Q96QK8 99 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF717Q9BY31 904 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 RERGLQ9H628 205 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 GPR83Q9NYM4 423 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TEKT2Q9UIF3 430 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MKLN1Q9UL63 735 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 PHIPQ8WWQ0 1821 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 A0A0U1RQS6 177 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 C12orf71A8MTZ7 269 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 M0R129 80 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ERVH48-1M5A8F1 160 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 E2F3O00716 465 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 KIAA0513O60268 411 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 LRATO95237 230 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SERPINF2P08697 491 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 BMP1P13497 986 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 PRKACBP22694 351 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 STC1P52823 247 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CXCR4P61073 352 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SNRPD2P62316 118 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ARRDC4Q8NCT1 418 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CCDC115Q96NT0 180 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ARNT2Q9HBZ2 717 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TRMT6Q9UJA5 497 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SPEF1Q9Y4P9 236 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MIA3Q5JRA6 1907 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 A0A1W2PQ72 361 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 OR6C70A6NIJ9 312 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 TLR5O60602 858 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC19A1P41440 591 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 GDF5P43026 501 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 PGFP49763 221 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FAM189BP81408 668 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ELP6Q0PNE2 266 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NPRL3Q12980 569 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 KEAP1Q14145 624 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 SYCE2Q6PIF2 218 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ENTHD1Q8IYW4 607 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 PGBD5Q8N414 524 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 OR5H6Q8NGV6 325 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 IPPKQ9H8X2 491 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 STMN3Q9NZ72 180 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 COL1A2P08123 1366 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 UGT2B10P36537 528 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF135P52742 658 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF648Q5T619 568 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 CDKN2AIPNLQ96HQ2 116 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 INPP5KQ9BT40 448 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 HEBP1Q9NRV9 189 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 COQ3Q9NZJ6 369 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 MUTYHQ9UIF7 546 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 MYLKQ15746 1914 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 COL4A5P29400 1685 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 C1QCP02747 245 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 HOXA9P31269 272 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 CACHD1Q5VU97 1274 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 DOK6Q6PKX4 331 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NOXA1Q86UR1 476 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 FAM217AQ8IXS0 508 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NATD1Q8N6N6 113 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 OR4K2Q8NGD2 314 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 HCAR2Q8TDS4 363 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 SNAPC3Q92966 411 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 OMA1Q96E52 524 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 KLRG1Q96E93 195 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 BPIFA1Q9NP55 256 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF490Q9ULM2 529 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms