RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NAT9Q9BTE0 207 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 RAB33BQ9H082 229 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 RAB17Q9H0T7 212 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 TFB2MQ9H5Q4 396 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLAC1Q9HBJ0 212 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 INTS10Q9NVR2 710 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SOHLH2Q9NX45 425 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SPHK1Q9NYA1 384 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACTR10Q9NZ32 417 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GRHL1Q9NZI5 618 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 WHRNQ9P202 907 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 DKK4Q9UBT3 224 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC39A10Q9ULF5 831 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ICKQ9UPZ9 632 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLHL20Q9Y2M5 609 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 B3GALT1Q9Y5Z6 326 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 FRYLO94915 3013 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 DMXL1Q9Y485 3027 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 MN1Q10571 1320 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTAGE15A4D2H0 777 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CXorf49A8MYA2 514 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 C2orf74A8MZ97 194 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 B4E171 279 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 H3BMM5 538 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 KIF2AO00139 706 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 NVLO15381 856 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TOX3O15405 576 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 VPS26AO75436 327 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 C1orf105O95561 183 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TTC4O95801 387 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TUBB4AP04350 444 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 NTRK1P04629 796 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CHRM5P08912 532 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTAGE8P0CG41 777 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ST6GAL1P15907 406 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF28P17035 718 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 NELFEP18615 380 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CD9P21926 228 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 SHMT2P34897 504 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TSPAN7P41732 249 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 GRIA3P42263 894 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 MAGEA4P43358 317 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CLCN7P51798 805 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 HSD11B2P80365 405 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 SF1Q15637 639 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 KYNUQ16719 465 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TMTC4Q5T4D3 741 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ARHGAP40Q5TG30 622 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 HECTD2Q5U5R9 776 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 BROXQ5VW32 411 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ARMC3Q5W041 872 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 PAQR3Q6TCH7 311 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZDHHC24Q6UX98 284 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 UNC5DQ6UXZ4 953 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CEACAM20Q6UY09 585 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CYHR1Q6ZMK1 362 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CCDC81Q6ZN84 652 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 C3orf62Q6ZUJ4 267 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF572Q7Z3I7 529 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 STRA8Q7Z7C7 330 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CLEC14AQ86T13 490 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTAGE6Q86UF2 777 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TRIM73Q86UV7 250 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 VASH2Q86V25 355 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTAGE4Q8IX94 777 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 SPACA3Q8IXA5 215 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 CPNE9Q8IYJ1 553 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 MMGT1Q8N4V1 131 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 IL22RA1Q8N6P7 574 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 BMPERQ8N8U9 685 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 C2CD4AQ8NCU7 369 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 PPFIBP2Q8ND30 876 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR5K2Q8NHB8 316 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 GABPB2Q8TAK5 448 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 FBXO25Q8TCJ0 367 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 EEF1AKMT1Q8WVE0 214 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 KLHL6Q8WZ60 621 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 UBXN4Q92575 508 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 RAD51AP1Q96B01 352 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ALKBH8Q96BT7 664 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 LRRC39Q96DD0 335 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 MRRFQ96E11 262 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 FOPNLQ96NB1 174 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 TRAPPC9Q96Q05 1148 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 OR2A14Q96R47 310 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 AARSD1Q9BTE6 412 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ASPSCR1Q9BZE9 553 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZNF768Q9H5H4 540 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 PDE7BQ9NP56 450 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 FBXO8Q9NRD0 319 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 LATS2Q9NRM7 1088 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZFATQ9P243 1243 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 EPHA6Q9UF33 1036 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 DMGDHQ9UI17 866 aaKnown RBP5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 ADAMTS6Q9UKP5 1117 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 RARRES3Q9UL19 164 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 MED16Q9Y2X0 877 aa5.58□□□□□ -1.52
HMGB3P24-201ENST00000433260 VWA7Q9Y334 891 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms