RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CYB5D1Q6P9G0 228 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 UNC5DQ6UXZ4 953 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PRICKLE2Q7Z3G6 844 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 CILP2Q8IUL8 1156 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 SYTL1Q8IYJ3 562 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ENDOVQ8N8Q3 282 aaKnown RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 MCUQ8NE86 351 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ADAMTS17Q8TE56 1095 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 APOBEC4Q8WW27 367 aaKnown RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF669Q96BR6 464 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PDLIM2Q96JY6 352 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 DDX47Q9H0S4 455 aaKnown RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 GNPTGQ9UJJ9 305 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 KCND3Q9UK17 655 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PYCARDQ9ULZ3 195 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 FARSAQ9Y285 508 aaKnown RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 SDR42E2A6NKP2 422 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 AP3B1O00203 1094 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 RASGRF2O14827 1237 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CNOT3O75175 753 aaKnown RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 MLNP12872 115 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CYP2A7P20853 494 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 IVDP26440 423 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 GRIA3P42263 894 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 ITGA1P56199 1179 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 DHX34Q14147 1143 aaKnown RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 FASTKQ14296 549 aaKnown RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 KIR2DS3Q14952 304 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 UGT8Q16880 541 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 RNASEH2BQ5TBB1 312 aaKnown RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 C1orf189Q5VU69 101 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 IZUMO3Q5VZ72 239 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CASC4Q6P4E1 433 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CNSTQ6PJW8 725 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 LRRC6Q86X45 466 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 IGDCC3Q8IVU1 814 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 DCUN1D3Q8IWE4 304 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 OR2L8Q8NGY9 312 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 GIMAP7Q8NHV1 300 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CLIP3Q96DZ5 547 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 TCTN2Q96GX1 697 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 PWWP2AQ96N64 755 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 GPR87Q9BY21 358 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CHRNA10Q9GZZ6 450 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 PLAC1Q9HBJ0 212 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 SYTL2Q9HCH5 934 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 FBXO6Q9NRD1 293 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-204ENST00000430682 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 TLK1Q9UKI8 766 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 POLHQ9Y253 713 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 TP53TG5Q9Y2B4 290 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 LRRK2Q5S007 2527 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 CNTRLQ7Z7A1 2325 aa12.05□□□□□ -0.48
SMPD4-204ENST00000430682 SCN3AQ9NY46 2000 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SHANK1Q9Y566 2161 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 E7EQ34 232 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 KIF5CO60282 957 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 OR2B3O76000 313 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 MATN4O95460 622 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 RECKO95980 971 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SFTPCP11686 197 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 PKMP14618 531 aaKnown RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 ITGAXP20702 1163 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 FNTAP49354 379 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 CLCN7P51798 805 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 TIAL1Q01085 375 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF470Q6ECI4 717 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 OTOAQ7RTW8 1153 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 DTWD1Q8N5C7 304 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 C9orf43Q8TAL5 461 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 PANX3Q96QZ0 392 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 TCF12Q99081 682 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 TSSK1BQ9BXA7 367 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SYNPO2LQ9H987 977 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 FANCEQ9HB96 536 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 XAB2Q9HCS7 855 aaKnown RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SLC22A11Q9NSA0 550 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 DHCR7Q9UBM7 475 aaKnown RBP12.04□□□□□ -0.48
SMPD4-204ENST00000430682 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 SCN2AQ99250 2005 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 DOPEY2Q9Y3R5 2298 aa12.04□□□□□ -0.48
SMPD4-204ENST00000430682 ARHGEF33A8MVX0 844 aa12.03□□□□□ -0.48
SMPD4-204ENST00000430682 F8W8V4 182 aa12.03□□□□□ -0.48
SMPD4-204ENST00000430682 CES2O00748 559 aa12.03□□□□□ -0.48
SMPD4-204ENST00000430682 CTSVO60911 334 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms