RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 SPATA7Q9P0W8 599 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 CHST10O43529 356 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ITGAXP20702 1163 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 RPS9P46781 194 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 NRLP54845 237 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 STX4Q12846 297 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 NUDT13Q86X67 352 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 NPWQ8N729 165 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 DUSP26Q9BV47 211 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 DOCK4Q8N1I0 1966 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PCDH7O60245 1069 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 KCNJ13O60928 360 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 CYP7B1O75881 506 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 NUDT14O95848 222 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 EDN1P05305 212 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PAOXQ6QHF9 649 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ADAMTS15Q8TE58 950 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GPN3Q9UHW5 284 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PRORSD1PA6NEY8 169 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 A8MUI8 341 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ACADVLP49748 655 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 MANEALQ5VSG8 457 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PTCHD4Q6ZW05 846 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 SCN10AQ9Y5Y9 1956 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 THRBP10828 461 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ALDH4A1P30038 563 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 AVPR1BP47901 424 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 THAP5Q7Z6K1 395 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ZUFSPQ96AP4 578 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 L3HYPDHQ96EM0 354 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GJD2Q9UKL4 321 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PCDHB11Q9Y5F2 797 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 CNTN5O94779 1100 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 UBXN7O94888 489 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 RHOP08100 348 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 MYBPC3Q14896 1274 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SLC9A5Q14940 896 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 KHDC1Q4VXA5 237 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 NCEH1Q6PIU2 408 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 OR9A1PQ8NGU1 263 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 C12orf66Q96MD2 445 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 ABCG8Q9H221 673 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SERHL2Q9H4I8 314 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 IL1RAPQ9NPH3 570 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SERHLQ9NQF3 203 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 CTSAP10619 480 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 HRH2P25021 359 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 TTC29Q8NA56 475 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 OR10A6Q8NH74 314 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 CAMK1GQ96NX5 476 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 PTPN18Q99952 460 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 RIOK2Q9BVS4 552 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 ATG10Q9H0Y0 220 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 PAIP2BQ9ULR5 123 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 CAPN8A6NHC0 703 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 GTPBP1O00178 669 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SNNO75324 88 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 ALPPL2P10696 532 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 MTAPQ13126 283 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 BIKQ13323 160 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DCTN2Q13561 401 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 WDR36Q8NI36 951 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 ERAL1O75616 437 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 GDI1P31150 447 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 RALGDSQ12967 914 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 COQ5Q5HYK3 327 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DEF8Q6ZN54 512 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 OLFM1Q99784 485 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SEC13P55735 322 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 LMAN2Q12907 356 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DUOXA1Q1HG43 343 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 THOC6Q86W42 341 aaKnown RBP11.28□□□□□ -0.6
PTCH1-208ENST00000430669 GPR135Q8IZ08 494 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 LINC01465Q8N7H1 131 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 SMU1Q2TAY7 513 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms