RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
MSH5-208ENST00000429846 OR4L1Q8NH43 312 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 CARD6Q9BX69 1037 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 RAB11FIP5Q9BXF6 653 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 ETNK1Q9HBU6 452 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 INTS7Q9NVH2 962 aaKnown RBP14.33□□□□□ -0.12
MSH5-208ENST00000429846 EURLQ9NYK6 297 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 MAP10Q9P2G4 905 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 IMPACTQ9P2X3 320 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 PLAGL1Q9UM63 463 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 CDYLQ9Y232 598 aa14.33□□□□□ -0.12
MSH5-208ENST00000429846 PRRC2CQ9Y520 2896 aaKnown RBP14.33□□□□□ -0.12
MSH5-208ENST00000429846 A0A1B0GX78 115 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 TCRBV7S2A1N4TA0A589 114 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 AGPSO00116 658 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 LIASO43766 372 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 SEMA7AO75326 666 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 GPC4O75487 556 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 ALBP02768 609 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 APOA4P06727 396 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 PIM1P11309 404 aaPredicted RBP14.32□□□□□ -0.12
MSH5-208ENST00000429846 CD9P21926 228 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 CCR7P32248 378 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 GCGRP47871 477 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 HSPA14Q0VDF9 509 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 TMED2Q15363 201 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 OASLQ15646 514 aaKnown RBP14.32□□□□□ -0.12
MSH5-208ENST00000429846 ZC3H12BQ5HYM0 836 aaKnown RBP14.32□□□□□ -0.12
MSH5-208ENST00000429846 SEL1L2Q5TEA6 688 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 NAPRTQ6XQN6 538 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 PPP1R32Q7Z5V6 425 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 OR6P1Q8NGX9 317 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 MENTQ9BUN1 341 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 ZNF552Q9H707 407 aaPredicted RBP14.32□□□□□ -0.12
MSH5-208ENST00000429846 WDR54Q9H977 334 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 ATP13A2Q9NQ11 1180 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 ENAMQ9NRM1 1142 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 SLC2A6Q9UGQ3 507 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 ANAPC5Q9UJX4 755 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 MRFAP1Q9Y605 127 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 UTP20O75691 2785 aaKnown RBP14.32□□□□□ -0.12
MSH5-208ENST00000429846 DOPEY1Q5JWR5 2465 aa14.32□□□□□ -0.12
MSH5-208ENST00000429846 CNOT3O75175 753 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 ONECUT2O95948 504 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 IFNB1P01574 187 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 UMODP07911 640 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 MMP11P24347 488 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 AIMP2Q13155 320 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 MRPL49Q13405 166 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 SLC9A5Q14940 896 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 TCTE1Q5JU00 501 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 ZNF534Q76KX8 674 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 TMEM139Q8IV31 216 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 ZADH2Q8N4Q0 377 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 LINC01555Q8NAE3 123 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 PPHLN1Q8NEY8 458 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 OR2L8Q8NGY9 312 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 ATG4AQ8WYN0 398 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 SNRNP40Q96DI7 357 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 PANX3Q96QZ0 392 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 ILKAPQ9H0C8 392 aaPredicted RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 SLC26A1Q9H2B4 701 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 MRM3Q9HC36 420 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 CASS4Q9NQ75 786 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 NXT1Q9UKK6 140 aaKnown RBP14.31□□□□□ -0.12
MSH5-208ENST00000429846 TCAF1Q9Y4C2 921 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 CAPN6Q9Y6Q1 641 aa14.31□□□□□ -0.12
MSH5-208ENST00000429846 NBPF19A0A087WUL8 3843 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 PRMT5O14744 637 aaPredicted RBP14.3□□□□□ -0.12
MSH5-208ENST00000429846 RASGRF2O14827 1237 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 KPNA5O15131 536 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 SLCO2B1O94956 709 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 CTSBP07858 339 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 ALAS2P22557 587 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 AOAHP28039 575 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 TTPAP49638 278 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 CSE1LP55060 971 aaKnown RBP14.3□□□□□ -0.12
MSH5-208ENST00000429846 GRM7Q14831 915 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 EIF2S3LQ2VIR3 472 aaKnown RBP14.3□□□□□ -0.12
MSH5-208ENST00000429846 PLEKHN1Q494U1 663 aaPredicted RBP14.3□□□□□ -0.12
MSH5-208ENST00000429846 TTC23LQ6PF05 361 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 TTLL10Q6ZVT0 673 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 VRK3Q8IV63 474 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 MCATQ8IVS2 390 aaKnown RBP14.3□□□□□ -0.12
MSH5-208ENST00000429846 MPP5Q8N3R9 675 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 GSDMBQ8TAX9 411 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 PRR7Q8TB68 274 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 COG1Q8WTW3 980 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 VPS50Q96JG6 964 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 RAB6BQ9NRW1 208 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 SLC22A11Q9NSA0 550 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 CATSPERZQ9NTU4 200 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 PAK5Q9P286 719 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 GNPTGQ9UJJ9 305 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 SLC39A10Q9ULF5 831 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms