RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 FAM214AQ32MH5 1076 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 PLA2G15Q8NCC3 412 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 MAGEE2Q8TD90 523 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 PYDC1Q8WXC3 89 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 PRAP1Q96NZ9 151 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 CDADC1Q9BWV3 514 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.7■□□□□ 0.261e-10■■■■■ 33
SMARCA4-203ENST00000429416 NOL6Q9H6R4 1146 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 C19orf25Q9UFG5 118 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 IL7RP16871 459 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 RPS14P62263 151 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 DSC3Q14574 896 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 LHX8Q68G74 356 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 IZUMO2Q6UXV1 221 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 FAM110BQ8TC76 370 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 UBE2ZQ9H832 354 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 ZCCHC3Q9NUD5 404 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 VPS29Q9UBQ0 182 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 AP2A2O94973 939 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 CSNK2A2P19784 350 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 PM20D1Q6GTS8 502 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 CDC73Q6P1J9 531 aa16.7■□□□□ 0.26
SMARCA4-203ENST00000429416 ZNF860A6NHJ4 632 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CST1P01037 141 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CYP17A1P05093 508 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 KRT8P05787 483 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 MAOBP27338 520 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CDC42P60953 191 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CSNK2BP67870 215 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 PRKD1Q15139 912 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CILP2Q8IUL8 1156 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 SETD9Q8NE22 299 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 SLC35G5Q96KT7 338 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 C9orf16Q9BUW7 83 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 TRAPPC6AO75865 159 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 WFS1O76024 890 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 MEF2AQ02078 507 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 KCNJ11Q14654 390 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 TNFAIP8L2Q6P589 184 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ZNF730Q6ZMV8 503 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ZNF781Q8N8C0 355 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 SLC5A11Q8WWX8 675 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 STRA6Q9BX79 667 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 KLF16Q9BXK1 252 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 KCNN2Q9H2S1 579 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ELL3Q9HB65 397 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ZNF229Q9UJW7 825 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CDH1P12830 882 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 SLC7A1P30825 629 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 FAM220AQ7Z4H9 259 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 TSPAN33Q86UF1 283 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 TMEM125Q96AQ2 219 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ZSCAN32Q9NX65 697 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 AP4S1Q9Y587 144 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 KCNJ5P48544 419 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 CLCN7P51798 805 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 TDRD1Q9BXT4 1180 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 LDAHQ9H6V9 325 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ZC4H2Q9NQZ6 224 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 GALPQ9UBC7 116 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 ADGRE2Q9UHX3 823 aa16.69■□□□□ 0.26
SMARCA4-203ENST00000429416 H3BNC9 293 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 CDC123O75794 336 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 PCBP2Q15366 365 aaKnown RBP eCLIP16.68■□□□□ 0.268e-6■■□□□ 13.7
SMARCA4-203ENST00000429416 COLEC12Q5KU26 742 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 VN1R2Q8NFZ6 395 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 TEX47Q8TBZ9 253 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 RNFT2Q96EX2 444 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 TRIM39Q9HCM9 518 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 XKRYO14609 159 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 PRG2P13727 222 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 OASLQ15646 514 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 FRG2Q64ET8 278 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 FAM13CQ8NE31 585 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 TRPV3Q8NET8 790 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 FRG2BQ96QU4 278 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 CPEB1Q9BZB8 566 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 CXorf49A8MYA2 514 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 VEGFDO43915 354 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 GSTM5P46439 218 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 CLDN2P57739 230 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 HHEXQ03014 270 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 ZFP1Q6P2D0 407 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 LRRC70Q7Z2Q7 622 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 P4HA3Q7Z4N8 544 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 RABEPKQ7Z6M1 372 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 OXR1Q8N573 874 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 C1orf52Q8N6N3 182 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 MAFAQ8NHW3 353 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 GNB5O14775 395 aa16.68■□□□□ 0.26
SMARCA4-203ENST00000429416 EDF1O60869 148 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms