RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 BTN3A2P78410 334 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 CDKL1Q00532 357 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 GNA12Q03113 381 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 MZT1Q08AG7 82 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 QPRTQ15274 297 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 TEAD2Q15562 447 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 SNAPC1Q16533 368 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 ZNF674Q2M3X9 581 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 PDCD4Q53EL6 469 aaKnown RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 CXorf57Q6NSI4 855 aaKnown RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 RFWD3Q6PCD5 774 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 GCDHQ92947 438 aaPredicted RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 NPAS2Q99743 824 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 ZNF670Q9BS34 389 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 POLE4Q9NR33 117 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 NDUFA13Q9P0J0 144 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 WASF2Q9Y6W5 498 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 PRORSD1PA6NEY8 169 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 DUXAA6NLW8 204 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 GJE1A6NN92 205 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 C2orf74A8MZ97 194 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MAP2K7O14733 419 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MSI1O43347 362 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 TACSTD2P09758 323 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CCND3P30281 292 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 CSKP41240 450 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 RFX5P48382 616 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 CLCNKBP51801 687 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 YBEYP58557 167 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 CD47Q08722 323 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ITIH4Q14624 930 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PRRT3Q5FWE3 981 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ABHD17BQ5VST6 288 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 FBXO46Q6PJ61 603 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 CYP2R1Q6VVX0 501 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 HIPK1Q86Z02 1210 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF784Q8NCA9 323 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 CYB5D2Q8WUJ1 264 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 BADQ92934 168 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF878C9JN71 531 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ANKRD63C9JTQ0 380 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 KPNA4O00629 521 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 MDM4O15151 490 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NDUFS4O43181 175 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CPNE3O75131 537 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 PIGNO95427 931 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PRAMEF1O95521 474 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NDST3O95803 873 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SNRPB2P08579 225 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 IDO1P14902 403 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PVALBP20472 110 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 S100A7P31151 101 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 VIPR1P32241 457 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ARCN1P48444 511 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 NDST2P52849 883 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CDH15P55291 814 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC4-206ENST00000427635 ENPEPQ07075 957 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SLC25A52Q3SY17 297 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PLCZ1Q86YW0 608 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF567Q8N184 647 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MEIOBQ8N635 442 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 DBF4BQ8NFT6 615 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NLGN2Q8NFZ4 835 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZBED6CLQ96FA7 236 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 GFM1Q96RP9 751 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 RTKNQ9BST9 563 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SNRNP25Q9BV90 132 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 LRTM1Q9HBL6 345 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PDP2Q9P2J9 529 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ATXN10Q9UBB4 475 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF639Q9UID6 485 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 RARRES3Q9UL19 164 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CDC42BPAQ5VT25 1732 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 A0A1W2PPL8 197 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ISPDA4D126 451 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 HTR3EA5X5Y0 456 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 TMEM150BA6NC51 233 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 BTBD17A6NE02 478 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 A6NLC8 198 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 TP73O15350 636 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 YKT6O15498 198 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PRAMEF12O95522 483 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CST1P01037 141 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 FAM153BP0C7A2 387 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 EPHA4P54764 986 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CAPSQ13938 189 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 RAB33AQ14088 237 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 GBX1Q14549 363 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MELKQ14680 651 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MAD2L1BPQ15013 274 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 LPAL2Q16609 132 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SLC5A9Q2M3M2 681 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 Q3ZCU0 254 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 WDR93Q6P2C0 686 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SLC22A25Q6T423 547 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SLC9A9Q8IVB4 645 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 LRRC17Q8N6Y2 441 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms