RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PCDHA9Q9Y5H5 950 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SNX8Q9Y5X2 465 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TAF1LQ8IZX4 1826 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CROCCQ5TZA2 2017 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 GLYATL1P3A0A0U1RQE8 302 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A1W2PPL8 197 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TCRBV5S1A1TA0A578 114 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM234BA2RU67 622 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM181BA6NEQ2 426 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 WTIPA6NIX2 430 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARHGEF33A8MVX0 844 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 B4DXG7 233 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 MCIDASD6RGH6 385 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 E9PAM4 449 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TEX46H3BTG2 121 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 M0R233 179 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HNRNPDLO14979 420 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF623O75123 536 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CRCPO75575 148 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PSMD10O75832 226 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 IPO13O94829 963 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PGLSO95336 258 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HLA-DQB1P01920 261 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 MT-ND2P03891 347 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 AMHP03971 560 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HLA-DOAP06340 250 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CHRNGP07510 517 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TSPAN19P0C672 248 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SAGP10523 405 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TYRP14679 529 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAB4AP20338 218 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 LHCGRP22888 699 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CHMP24386 653 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RPL10P27635 214 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SFNP31947 248 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TGFBR2P37173 567 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARL4AP40617 200 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CRKP46108 304 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 JAK3P52333 1124 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 LSM3P62310 102 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RPL7AP62424 266 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 NFKB2Q00653 900 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 EMX2Q04743 252 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FGL1Q08830 312 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAD2L1Q13257 205 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLAMF1Q13291 335 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TP53BP2Q13625 1128 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RCAN2Q14206 197 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TOMM20Q15388 145 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SWI5Q1ZZU3 235 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC35G1Q2M3R5 365 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 DPY19L1Q2PZI1 675 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 WSCD2Q2TBF2 565 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM214AQ32MH5 1076 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZIK1Q3SY52 487 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PITRM1Q5JRX3 1037 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PM20D1Q6GTS8 502 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF425Q6IV72 752 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PYHIN1Q6K0P9 492 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CES5AQ6NT32 575 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 MZT2AQ6P582 158 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRMT10BQ6PF06 316 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 AFTPHQ6ULP2 937 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPESP1Q6UW49 350 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM131AQ6UXB0 335 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CFAP77Q6ZQR2 320 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RTL4Q6ZR62 310 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANKS3Q6ZW76 656 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 OTOP1Q7RTM1 612 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HSD17B13Q7Z5P4 300 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADGRD2Q7Z7M1 963 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 DDX53Q86TM3 631 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CUZD1Q86UP6 607 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZC3HC1Q86WB0 502 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SNX29P2Q8IUI4 249 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CCDC117Q8IWD4 279 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAVER1Q8IY67 606 aaKnown RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TNS4Q8IZW8 715 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 STPG2Q8N412 459 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 C9orf62Q8N4C0 152 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATPAF2Q8N5M1 289 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TBC1D19Q8N5T2 526 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 DPP10Q8N608 796 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 WDR48Q8TAF3 677 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 PPP1R13LQ8WUF5 828 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HTR3CQ8WXA8 447 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 ASB13Q8WXK3 278 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 HGDQ93099 445 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 FBXW5Q969U6 566 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM125Q96AQ2 219 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 BIRC7Q96CA5 298 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 MFSD3Q96ES6 412 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC47A1Q96FL8 570 aa5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 OTUB1Q96FW1 271 aaPredicted RBP5.49□□□□□ -1.53
VTI1BP4-201ENST00000427516 CPB2Q96IY4 423 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms