RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 HCN3Q9P1Z3 774 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 SATB2Q9UPW6 733 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 A8MT66 165 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 PIRO00625 290 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 HAT1O14929 419 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 BEST1O76090 585 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 GADD45GO95257 159 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 SEPHS1P49903 392 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 CLCN7P51798 805 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 ARFIP1P53367 373 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 PNLIPRP1P54315 467 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 GHRHRQ02643 423 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 RGS21Q2M5E4 152 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 ZNF776Q68DI1 518 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-207ENST00000426142 THAP5Q7Z6K1 395 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 SLCO6A1Q86UG4 719 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 ZNF483Q8TF39 744 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-207ENST00000426142 GIPC3Q8TF64 312 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 SLC25A36Q96CQ1 311 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 RAB11FIP5Q9BXF6 653 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 GPR62Q9BZJ7 368 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
CTNND1-207ENST00000426142 ZDHHC18Q9NUE0 388 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 CDH7Q9ULB5 785 aa7.76□□□□□ -1.17
CTNND1-207ENST00000426142 MYH2Q9UKX2 1941 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TMEM150CB9EJG8 249 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ALPPP05187 535 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 RB1P06400 928 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GGT5P36269 586 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 RPS9P46781 194 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 HCAR3P49019 387 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ACTR3P61158 418 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SOX4Q06945 474 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 DCTN2Q13561 401 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GPR68Q15743 365 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SLC5A9Q2M3M2 681 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 METTL21CQ5VZV1 264 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 THOC6Q86W42 341 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 OR5M3Q8NGP4 307 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 FAR1Q8WVX9 515 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 AP3S1Q92572 193 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ZNF514Q96K75 400 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 NSMCE3Q96MG7 304 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GINS4Q9BRT9 223 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 NUSAP1Q9BXS6 441 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 PCDHAC1Q9H158 963 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 OXSMQ9NWU1 459 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GALPQ9UBC7 116 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 BAZ2AQ9UIF9 1905 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ARFGEF2Q9Y6D5 1785 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 RGS10O43665 173 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SCELO95171 688 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TYRP1P17643 537 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 RFC2P35250 354 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GNALP38405 381 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 PREPP48147 710 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 MC1RQ01726 317 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SCARB2Q14108 478 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 QPRTQ15274 297 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 EOGTQ5NDL2 527 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 DENND5AQ6IQ26 1287 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SUSD1Q6UWL2 747 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 C1orf52Q8N6N3 182 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SMG8Q8ND04 991 aaKnown RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ROPN1LQ96C74 230 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 IFT27Q9BW83 186 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ZNF395Q9H8N7 513 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SMPD3Q9NY59 655 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 VPS29Q9UBQ0 182 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 CKLFQ9UBR5 152 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 PHF11Q9UIL8 331 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 DMTF1Q9Y222 760 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 CLCA3PQ9Y6N3 262 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 UBE2QL1A1L167 161 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 STX16-NPEPL1H3BU86 382 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 STX16O14662 325 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 CYP11A1P05108 521 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 C8orf89P0DMQ9 161 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 FUT4P22083 530 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 PEX2P28328 305 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 MPIP34949 423 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 STK19P49842 368 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TARDBPQ13148 414 aaKnown RBP eCLIP7.75□□□□□ -1.171e-8■■■■□ 21.9
CTNND1-207ENST00000426142 IL18Q14116 193 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TOR1AIP1Q5JTV8 583 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 MBOAT1Q6ZNC8 495 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TBX5Q99593 518 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 GAL3ST1Q99999 423 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SLC35A5Q9BS91 424 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 TMEM109Q9BVC6 243 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 DENND2DQ9H6A0 471 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 AKTIPQ9H8T0 292 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ZNF282Q9UDV7 671 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-207ENST00000426142 SPEF2Q9C093 1822 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 CACNA1FO60840 1977 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 FAM72CH0Y354 149 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 ANGPTL1O95841 491 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 OPN1SWP03999 348 aa7.75□□□□□ -1.17
CTNND1-207ENST00000426142 OC90Q02509 493 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms