RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PTPN4P29074 926 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 SLC1A2P43004 574 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 RPS18P62269 152 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 DHX9Q08211 1270 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 THOC5Q13769 683 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 LONRF1Q17RB8 773 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 DEFB110Q30KQ9 67 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 IZUMO3Q5VZ72 239 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 ZNF385CQ66K41 422 aaPredicted RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 KLHL7Q8IXQ5 586 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 MR1Q95460 341 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 PWWP2AQ96N64 755 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 GPR87Q9BY21 358 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 ACTL8Q9H568 366 aa17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 C20orf96Q9NUD7 363 aaPredicted RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 FARSAQ9Y285 508 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-205ENST00000425815 FASNP49327 2511 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 A0A1W2PPV9 198 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 TP73O15350 636 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 MAP3K7O43318 606 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 HAUS5O94927 633 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 CYP2A7P20853 494 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 ATP5DP30049 168 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 CCR10P46092 362 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 ITGA1P56199 1179 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 MPP1Q00013 466 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 HSP90AA5PQ58FG0 334 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 FCRL6Q6DN72 434 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 CNSTQ6PJW8 725 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 CYHR1Q6ZMK1 362 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 ZNF605Q86T29 641 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 TAX1BP1Q86VP1 789 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 HOOK3Q86VS8 718 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 ZBTB2Q8N680 514 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 RAD51AP1Q96B01 352 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 EBNA1BP2Q99848 306 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 WDR83Q9BRX9 315 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 ACTR5Q9H9F9 607 aaPredicted RBP17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 TSR3Q9UJK0 312 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 FBXO5Q9UKT4 447 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 KCNMB2Q9Y691 235 aa17.66■□□□□ 0.42
SMARCAL1-205ENST00000425815 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 E7EQ34 232 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 KLK3P07288 261 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 PLA2G2AP14555 144 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 MAGP20916 626 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 GABRB3P28472 473 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 NFATC3Q12968 1075 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 FASTKQ14296 549 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 KLHL38Q2WGJ6 581 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 FAM69BQ5VUD6 431 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 GSDMBQ8TAX9 411 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 HMGCLL1Q8TB92 370 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 SKA2Q8WVK7 121 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 APOBEC4Q8WW27 367 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 CLIP3Q96DZ5 547 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 SLC25A18Q9H1K4 315 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 ADNPQ9H2P0 1102 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 IARS2Q9NSE4 1012 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 KLHL42Q9P2K6 505 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 SLC39A10Q9ULF5 831 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 VPS9D1Q9Y2B5 631 aa17.65■□□□□ 0.42
SMARCAL1-205ENST00000425815 CDC14CA4D256 554 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 ARHGEF33A8MVX0 844 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 PSIP1O75475 530 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 RAB40ALP0C0E4 278 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 ERVK-10P10266 1014 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 SFTPCP11686 197 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 PGAM1P18669 254 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 CCNFP41002 786 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 GCGRP47871 477 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 YBX1P67809 324 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 NFKB2Q00653 900 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 DR1Q01658 176 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 KCNAB2Q13303 367 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 IL10RAQ13651 578 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 CRYMQ14894 314 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 CYP2A13Q16696 494 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 PTCHD3Q3KNS1 767 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 HIBCHQ6NVY1 386 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 TTC23LQ6PF05 361 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 FIGLAQ6QHK4 219 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 FAM198BQ6UWH4 519 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 SYDE1Q6ZW31 735 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 LMNTD2Q8IXW0 634 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 SYTL1Q8IYJ3 562 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 C17orf53Q8N3J3 647 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 C2CD4AQ8NCU7 369 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 KCNJ9Q92806 393 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 SLC22A18Q96BI1 424 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 TRIM51Q9BSJ1 452 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 PLCL2Q9UPR0 1127 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 DHRS7Q9Y394 339 aa17.64■□□□□ 0.41
SMARCAL1-205ENST00000425815 ZNF462Q96JM2 2506 aa17.63■□□□□ 0.41
SMARCAL1-205ENST00000425815 TTI1O43156 1089 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms