RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SNRNP200O75643 2136 aaKnown RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 KRT87PA6NCN2 255 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 ISM1B1AKI9 464 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 TMEM150CB9EJG8 249 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 E5RI56 91 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 E7ESA3 106 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 H3BMH7 237 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 NKX2-8O15522 239 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 HCRTR1O43613 425 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 PSIP1O75475 530 aaKnown RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 SCRG1O75711 98 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 CCNFP41002 786 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 CRTC2Q53ET0 693 aaPredicted RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 HP1BP3Q5SSJ5 553 aaPredicted RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 CYHR1Q6ZMK1 362 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 ZNF517Q6ZMY9 492 aaPredicted RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 C2orf73Q8N5S3 287 aaPredicted RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 SKA2Q8WVK7 121 aaPredicted RBP17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 CERS2Q96G23 380 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 TCTN2Q96GX1 697 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 FOPNLQ96NB1 174 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 LRFN5Q96NI6 719 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 ERP44Q9BS26 406 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 RAB11FIP5Q9BXF6 653 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 CROTQ9UKG9 612 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 PCDHGA6Q9Y5G7 932 aa17.27■□□□□ 0.36
IGHV3-47-201ENST00000425060 FAM187AA6NFU0 413 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 ZNF891A8MT65 544 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 RAD51CO43502 376 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 CPNE3O75131 537 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 AHSGP02765 367 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 CCNYL3P0C7X3 344 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 ERGP11308 486 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 DLSTP36957 453 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 ARL4CP56559 192 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 GPS2Q13227 327 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 FRG1Q14331 258 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 TBR1Q16650 682 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 HIF1AQ16665 826 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 TEDDM1Q5T9Z0 273 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 TTC23LQ6PF05 361 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 TRMT10BQ6PF06 316 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 KIAA0408Q6ZU52 694 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 ZNF572Q7Z3I7 529 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 GALNT7Q86SF2 657 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 TMEM126BQ8IUX1 230 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 FAM20CQ8IXL6 584 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 DNAJC22Q8N4W6 341 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 CD200R1Q8TD46 325 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 INPP5DQ92835 1189 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 SLC22A18Q96BI1 424 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 GPR21Q99679 349 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 CCDC68Q9H2F9 335 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 FANCEQ9HB96 536 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 ZC3H7BQ9UGR2 993 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 CHMP2BQ9UQN3 213 aa17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
IGHV3-47-201ENST00000425060 A0A1W2PPV9 198 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 ARHGEF33A8MVX0 844 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 MAP3K7O43318 606 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 MPC1LP0DKB6 136 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 RORAP35398 523 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 CARSP49589 748 aaKnown RBP17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 C2orf54Q08AI8 447 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 CUL1Q13616 776 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 CYP2A13Q16696 494 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 TTLL9Q3SXZ7 439 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 TAF1BQ53T94 588 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 FAM199XQ6PEV8 388 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 MAATS1Q7Z4T9 603 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 CT55Q8WUE5 264 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 STARD8Q92502 1023 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 EXTL1Q92935 676 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 SEMA4CQ9C0C4 833 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 SPATA7Q9P0W8 599 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 TSR3Q9UJK0 312 aaKnown RBP17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 SERTAD3Q9UJW9 196 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 ATRXP46100 2492 aa17.25■□□□□ 0.35
IGHV3-47-201ENST00000425060 GFYI3L273 518 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 MYO1CO00159 1063 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 C1QL1O75973 258 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 FKBP9O95302 570 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 PRB1P04280 392 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 CBSLP0DN79 551 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 TCN2P20062 427 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 MAGP20916 626 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 OAS2P29728 719 aaKnown RBP17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 CBSP35520 551 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 ITGA1P56199 1179 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 DNASE1L3Q13609 305 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 FASTKD3Q14CZ7 662 aaKnown RBP17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 DUPD1Q68J44 220 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 DSELQ8IZU8 1212 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 EXD3Q8N9H8 876 aa17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 FBXO15Q8NCQ5 510 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-47-201ENST00000425060 BBOF1Q8ND07 529 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms