RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FTH1P02794 183 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 CBSLP0DN79 551 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 PEBP1P30086 187 aaKnown RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 CASQ1P31415 396 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 CBSP35520 551 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 GCGRP47871 477 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 PGDP52209 483 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 ACVR1Q04771 509 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 PRKAA1Q13131 559 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 TRIM73Q86UV7 250 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 OR5AR1Q8NGP9 310 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 SMAD5Q99717 465 aaKnown RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 CHRNA10Q9GZZ6 450 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 SPRTNQ9H040 489 aaPredicted RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 IL1RAPL1Q9NZN1 696 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.41
VRK3-203ENST00000424804 PCDHGB7Q9Y5F8 929 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 ITPR2Q14571 2701 aa12.52□□□□□ -0.41
VRK3-203ENST00000424804 TTLL8A6PVC2 850 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 F8W8V4 182 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 QSOX1O00391 747 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 SEMA7AO75326 666 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 UGT2B7P16662 529 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 PAMP19021 973 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 FOXL2P58012 376 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 ATP1A4Q13733 1029 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 NCF4Q15080 339 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 INPP5JQ15735 1006 aaPredicted RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 CRB2Q5IJ48 1285 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 PTRHD1Q6GMV3 140 aaKnown RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 SPESP1Q6UW49 350 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 CAND1Q86VP6 1230 aaKnown RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 ATCAYQ86WG3 371 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 DNAJC22Q8N4W6 341 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 PEX13Q92968 403 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 HGH1Q9BTY7 390 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 MENTQ9BUN1 341 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 XAB2Q9HCS7 855 aaKnown RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
VRK3-203ENST00000424804 SERTAD3Q9UJW9 196 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 SOX13Q9UN79 622 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
VRK3-203ENST00000424804 PCM1Q15154 2024 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 SDR42E2A6NKP2 422 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 IQCF5A8MTL0 148 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 C2orf74A8MZ97 194 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 MASP2O00187 686 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 GSTM1P09488 218 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 CYP2A7P20853 494 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 TTPAP49638 278 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 DR1Q01658 176 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 GSTM4Q03013 218 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 THOC5Q13769 683 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 PTK6Q13882 451 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 SLC6A19Q695T7 634 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 PACS1Q6VY07 963 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 MED25Q71SY5 747 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 SDCCAG8Q86SQ7 713 aaPredicted RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 KRT222Q8N1A0 295 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 C19orf47Q8N9M1 422 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 KRT12Q99456 494 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 KIFC1Q9BW19 673 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 TSSK1BQ9BXA7 367 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 MRM3Q9HC36 420 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 TDRKHQ9Y2W6 561 aaKnown RBP12.5□□□□□ -0.41
VRK3-203ENST00000424804 ZNF451Q9Y4E5 1061 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 CACNA1DQ01668 2161 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 POLEQ07864 2286 aa12.5□□□□□ -0.41
VRK3-203ENST00000424804 CNTRLQ7Z7A1 2325 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 A6NL46 340 aa12.49□□□□□ -0.41
VRK3-203ENST00000424804 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms