RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 WDFY3Q8IZQ1 3526 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 TMEM150CB9EJG8 249 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 KIF2AO00139 706 aaPredicted RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 SCRG1O75711 98 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 URI1O94763 535 aaPredicted RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 FKBP9O95302 570 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 F7P08709 466 aaPredicted RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 TPBGLP0DKB5 382 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 CBSLP0DN79 551 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 LIFP15018 202 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 PVRP15151 417 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 CBSP35520 551 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 SKIV2L2P42285 1042 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 RGS4P49798 205 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 CLCN7P51798 805 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 MRPS25P82663 173 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 MC1RQ01726 317 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 CAV1Q03135 178 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 GBX1Q14549 363 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 KLHL38Q2WGJ6 581 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TAF1BQ53T94 588 aaPredicted RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 ACSBG2Q5FVE4 666 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 LRRC8EQ6NSJ5 796 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 PWWP2BQ6NUJ5 590 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TIPARPQ7Z3E1 657 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 GALNT7Q86SF2 657 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TRIM73Q86UV7 250 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TAX1BP1Q86VP1 789 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 ANKMY2Q8IV38 441 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 IGDCC3Q8IVU1 814 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 CNTN4Q8IWV2 1026 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 ZBED8Q8IZ13 594 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 GALNT6Q8NCL4 622 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 ZNF501Q96CX3 271 aaPredicted RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 PWWP2AQ96N64 755 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 IL17FQ96PD4 163 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 OR2A14Q96R47 310 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 GPR21Q99679 349 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 AARSD1Q9BTE6 412 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 SPRY4Q9C004 299 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 IRAK4Q9NWZ3 460 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 SPHK1Q9NYA1 384 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 SPATA7Q9P0W8 599 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 ZFATQ9P243 1243 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 SERTAD3Q9UJW9 196 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 PADI1Q9ULC6 663 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 RUVBL2Q9Y230 463 aaKnown RBP10.57□□□□□ -0.72
USP49-204ENST00000423567 DHRS7Q9Y394 339 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 TEX264Q9Y6I9 313 aa10.57□□□□□ -0.72
USP49-204ENST00000423567 AHCTF1Q8WYP5 2266 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ZNF839A8K0R7 811 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ZNF891A8MT65 544 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 E7EQ34 232 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 E7ESA3 106 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ERVH48-1M5A8F1 160 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 EIF3FO00303 357 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 EIF3HO15372 352 aaKnown RBP eCLIP10.56□□□□□ -0.72
USP49-204ENST00000423567 ZBTB14O43829 449 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 MATN4O95460 622 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 NTRK1P04629 796 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 KLK3P07288 261 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 HBQ1P09105 142 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 MSL3P1P0C860 447 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 MPC1LP0DKB6 136 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ZNF28P17035 718 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 CYP2A7P20853 494 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 DLSTP36957 453 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 HSD17B2P37059 387 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 STAT5AP42229 794 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ITGA1P56199 1179 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 KCNC4Q03721 635 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 MGAT5Q09328 741 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 SRSF6Q13247 344 aaKnown RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 CUL1Q13616 776 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 FRG1Q14331 258 aaKnown RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 GRB7Q14451 532 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 SF1Q15637 639 aaKnown RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 STEAP4Q687X5 459 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 C8orf74Q6P047 294 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ZNF549Q6P9A3 640 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 ZNF572Q7Z3I7 529 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 PALM2Q8IXS6 379 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 C2orf73Q8N5S3 287 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 GPATCH11Q8N954 259 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 OR9A1PQ8NGU1 263 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 RNF31Q96EP0 1072 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 LHX9Q9NQ69 397 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 NSMCE4AQ9NXX6 385 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 GALPQ9UBC7 116 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 KCND3Q9UK17 655 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 CORO1CQ9ULV4 474 aaPredicted RBP10.56□□□□□ -0.72
USP49-204ENST00000423567 PCDHB3Q9Y5E6 796 aa10.56□□□□□ -0.72
USP49-204ENST00000423567 PIKFYVEQ9Y2I7 2098 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms