RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 NFS1Q9Y697 457 aa9.38□□□□□ -0.91
HERC3-204ENST00000422770 IKBKGQ9Y6K9 419 aa9.38□□□□□ -0.91
HERC3-204ENST00000422770 PCM1Q15154 2024 aa9.38□□□□□ -0.91
HERC3-204ENST00000422770 URB1O60287 2271 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 KRT87PA6NCN2 255 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 PABPN1LA6NDY0 278 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 SLC9B1P1A6NJY1 282 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 FAM159BA6NKW6 160 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 B4E171 279 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 STMND1H3BQB6 276 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 TOX3O15405 576 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 SLCO2B1O94956 709 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 ZBTB11O95625 1053 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 CHRM5P08912 532 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 LIPCP11150 499 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 PVRP15151 417 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 UGT2B7P16662 529 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 MAP4P27816 1152 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 TSPAN7P41732 249 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 MC2RQ01718 297 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 CBLBQ13191 982 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 NAB1Q13506 487 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 GPR19Q15760 415 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 ACSBG2Q5FVE4 666 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 MANEAQ5SRI9 462 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 CYB5D1Q6P9G0 228 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 LRIG3Q6UXM1 1119 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 LMNTD1Q8N9Z9 388 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 C2CD4AQ8NCU7 369 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 MAGEC3Q8TD91 643 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 IL17FQ96PD4 163 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 TEFMQ96QE5 360 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 CCDC77Q9BR77 488 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 FUT8Q9BYC5 575 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 DPH1Q9BZG8 443 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 RAB33BQ9H082 229 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 TFB2MQ9H5Q4 396 aaKnown RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 FANCEQ9HB96 536 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 CPNE5Q9HCH3 593 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 PDE7BQ9NP56 450 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.37□□□□□ -0.91
HERC3-204ENST00000422770 POMT2Q9UKY4 750 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 RARRES3Q9UL19 164 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 COMMD10Q9Y6G5 202 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 ACACAQ13085 2346 aa9.37□□□□□ -0.91
HERC3-204ENST00000422770 A0A087WV48 116 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 STK17BO94768 372 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 CATP04040 527 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 CD82P27701 267 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 PRDX3P30048 256 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 PKLRP30613 574 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 MSH2P43246 934 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 ADARP55265 1226 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 TMPRSS3P57727 454 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 HSD11B2P80365 405 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 ACY1Q03154 408 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 TLE3Q04726 772 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 CLN3Q13286 438 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 FRG1Q14331 258 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 RBM20Q5T481 1227 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 ARHGAP40Q5TG30 622 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 UGT3A1Q6NUS8 523 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 ZNF549Q6P9A3 640 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 SPESP1Q6UW49 350 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 CCDC81Q6ZN84 652 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 PPP1R3BQ86XI6 285 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 CPNE9Q8IYJ1 553 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 ADGRF3Q8IZF5 1079 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 CACNA2D3Q8IZS8 1091 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 GOLGA6L1Q8N7Z2 621 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 BMPERQ8N8U9 685 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 KLHL6Q8WZ60 621 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 KCNJ9Q92806 393 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 INPP5DQ92835 1189 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 RAD51AP1Q96B01 352 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 SLC30A3Q99726 388 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 AARSD1Q9BTE6 412 aaKnown RBP9.36□□□□□ -0.91
HERC3-204ENST00000422770 RAB11FIP5Q9BXF6 653 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 SLC7A5P2Q9GIP4 190 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 VIPAS39Q9H9C1 493 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 FBXO8Q9NRD0 319 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 C1GALT1Q9NS00 363 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 NSMCE4AQ9NXX6 385 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 SPHK1Q9NYA1 384 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 TBK1Q9UHD2 729 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 PSAT1Q9Y617 370 aa9.36□□□□□ -0.91
HERC3-204ENST00000422770 A0A0J9YY10 115 aa9.35□□□□□ -0.91
HERC3-204ENST00000422770 TEX51A0A1B0GUA7 166 aa9.35□□□□□ -0.91
HERC3-204ENST00000422770 TMEM150CB9EJG8 249 aa9.35□□□□□ -0.91
HERC3-204ENST00000422770 RASGRF2O14827 1237 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms