RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MT-ND3P03897 115 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 CARSP49589 748 aaKnown RBP25.49■■□□□ 1.67
CDK9-202ENST00000421939 CUL1Q13616 776 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 FASTKD3Q14CZ7 662 aaKnown RBP25.49■■□□□ 1.67
CDK9-202ENST00000421939 TRMT10BQ6PF06 316 aaKnown RBP25.49■■□□□ 1.67
CDK9-202ENST00000421939 NEK10Q6ZWH5 1172 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 TMEM126BQ8IUX1 230 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 C2orf73Q8N5S3 287 aaPredicted RBP25.49■■□□□ 1.67
CDK9-202ENST00000421939 LMNTD1Q8N9Z9 388 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 FBXO36Q8NEA4 188 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 CD200R1Q8TD46 325 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 SLC22A18Q96BI1 424 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 EFHD1Q9BUP0 239 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 SLC17A6Q9P2U8 582 aa25.49■■□□□ 1.67
CDK9-202ENST00000421939 KRT87PA6NCN2 255 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 ARHGEF33A8MVX0 844 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 TMEM150CB9EJG8 249 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 CPNE3O75131 537 aaKnown RBP25.48■■□□□ 1.67
CDK9-202ENST00000421939 VPS26AO75436 327 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 SCRG1O75711 98 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 ENO3P13929 434 aaPredicted RBP25.48■■□□□ 1.67
CDK9-202ENST00000421939 GABRB3P28472 473 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 FRG1Q14331 258 aaKnown RBP25.48■■□□□ 1.67
CDK9-202ENST00000421939 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.48■■□□□ 1.67
CDK9-202ENST00000421939 DUPD1Q68J44 220 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 CDHR3Q6ZTQ4 885 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 GALNT7Q86SF2 657 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 INPP5DQ92835 1189 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 TCTN2Q96GX1 697 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 NDNQ99608 321 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 CHRNA10Q9GZZ6 450 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 FAM114A2Q9NRY5 505 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 SPATA7Q9P0W8 599 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 CDC23Q9UJX2 597 aa25.48■■□□□ 1.67
CDK9-202ENST00000421939 ERVH48-1M5A8F1 160 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 PSIP1O75475 530 aaKnown RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 CATP04040 527 aaKnown RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 NTRK1P04629 796 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 CBLBQ13191 982 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 ZIC1Q15915 447 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 SOWAHCQ53LP3 525 aaPredicted RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 TEDDM1Q5T9Z0 273 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 SPNS2Q8IVW8 549 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 OR1L3Q8NH93 324 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 DENND1AQ8TEH3 1009 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 SLC45A3Q96JT2 553 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 BBC3Q96PG8 261 aaPredicted RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 GRHL1Q9NZI5 618 aa25.47■■□□□ 1.67
CDK9-202ENST00000421939 TRMT6Q9UJA5 497 aaKnown RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 UTP11Q9Y3A2 253 aaKnown RBP25.47■■□□□ 1.67
CDK9-202ENST00000421939 SNRNP200O75643 2136 aaKnown RBP25.46■■□□□ 1.67
CDK9-202ENST00000421939 AHSGP02765 367 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 CBSLP0DN79 551 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 CBSP35520 551 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 FAM20CQ8IXL6 584 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 CPNE9Q8IYJ1 553 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 ZBED8Q8IZ13 594 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 HMGCLL1Q8TB92 370 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 TTC9Q92623 222 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 RAB17Q9H0T7 212 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 FAM60AQ9NP50 221 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 IL17BQ9UHF5 180 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 CROTQ9UKG9 612 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 PADI1Q9ULC6 663 aa25.46■■□□□ 1.67
CDK9-202ENST00000421939 SMG1Q96Q15 3661 aaKnown RBP25.46■■□□□ 1.67
CDK9-202ENST00000421939 ZNF891A8MT65 544 aaPredicted RBP25.45■■□□□ 1.66
CDK9-202ENST00000421939 MYO1CO00159 1063 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 EIF3FO00303 357 aaPredicted RBP25.45■■□□□ 1.66
CDK9-202ENST00000421939 ATXN7O15265 892 aaPredicted RBP25.45■■□□□ 1.66
CDK9-202ENST00000421939 URI1O94763 535 aaPredicted RBP25.45■■□□□ 1.66
CDK9-202ENST00000421939 CCNYL3P0C7X3 344 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 MPC1LP0DKB6 136 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 DLSTP36957 453 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 RBM20Q5T481 1227 aaKnown RBP25.45■■□□□ 1.66
CDK9-202ENST00000421939 UGT3A1Q6NUS8 523 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 OR9A1PQ8NGU1 263 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 SLC12A9Q9BXP2 914 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 LHX9Q9NQ69 397 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 TAS2R13Q9NYV9 303 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 ZFATQ9P243 1243 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 PCDHB3Q9Y5E6 796 aa25.45■■□□□ 1.66
CDK9-202ENST00000421939 CYP2A7P20853 494 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 MAGP20916 626 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 MCM3P25205 808 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 OAS2P29728 719 aaKnown RBP25.44■■□□□ 1.66
CDK9-202ENST00000421939 ITGA1P56199 1179 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 MGAT5Q09328 741 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 CYP2A13Q16696 494 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 WHAMMP3Q1A5X7 153 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 DEFB110Q30KQ9 67 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 N4BP2L2Q92802 583 aaPredicted RBP25.44■■□□□ 1.66
CDK9-202ENST00000421939 INTS7Q9NVH2 962 aaKnown RBP25.44■■□□□ 1.66
CDK9-202ENST00000421939 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.44■■□□□ 1.66
CDK9-202ENST00000421939 SERTAD3Q9UJW9 196 aa25.44■■□□□ 1.66
CDK9-202ENST00000421939 CORO1CQ9ULV4 474 aaPredicted RBP25.44■■□□□ 1.66
CDK9-202ENST00000421939 TERTO14746 1132 aaKnown RBP25.43■■□□□ 1.66
CDK9-202ENST00000421939 PRICKLE3O43900 615 aaPredicted RBP25.43■■□□□ 1.66
CDK9-202ENST00000421939 FKBP9O95302 570 aa25.43■■□□□ 1.66
CDK9-202ENST00000421939 ERGP11308 486 aa25.43■■□□□ 1.66
CDK9-202ENST00000421939 SKIV2L2P42285 1042 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms