RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LIMK2P53671 638 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 HDAC4P56524 1084 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 SNRPFP62306 86 aaKnown RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 CDK18Q07002 472 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 INCA1Q0VD86 236 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 ADIGQ0VDE8 80 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 MGAT2Q10469 447 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 SEMA3AQ14563 771 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 LONRF1Q17RB8 773 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 RABGAP1LQ5R372 815 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 TPRG1LQ5T0D9 272 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 RRAGBQ5VZM2 374 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 RAP1GAP2Q684P5 730 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 NADSYN1Q6IA69 706 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 JMJD6Q6NYC1 403 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 ENPP7Q6UWV6 458 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 VPS36Q86VN1 386 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 CCAR2Q8N163 923 aaKnown RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 TTC39CQ8N584 583 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 PAF1Q8N7H5 531 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 ANKRD52Q8NB46 1076 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 MYRIPQ8NFW9 859 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 KIAA1524Q8TCG1 905 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 NDRG1Q92597 394 aaKnown RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 TSACCQ96A04 125 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 SERPINB11Q96P15 392 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 TWNKQ96RR1 684 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 KLF6Q99612 283 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 TWSG1Q9GZX9 223 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 CYP3A43Q9HB55 503 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 CNGB3Q9NQW8 809 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 AGPAT3Q9NRZ7 376 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 SLC12A6Q9UHW9 1150 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 MRPS18BQ9Y676 258 aaKnown RBP4.84□□□□□ -1.63
SFXN1-202ENST00000421887 RPS6KL1Q9Y6S9 549 aa4.84□□□□□ -1.63
SFXN1-202ENST00000421887 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 YJEFN3A6XGL0 299 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 FAM171A2A8MVW0 826 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 B4E171 279 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 E7ENQ6 273 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 E7ENX8 843 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 XPO1O14980 1071 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 POLR1CO15160 346 aaPredicted RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 LRRTM2O43300 516 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 TM7SF2O76062 418 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 STK17BO94768 372 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CBX6O95503 412 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ASS1P00966 412 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 MTHFD1P11586 935 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 COX6B1P14854 86 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CD1EP15812 388 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CAPN3P20807 821 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ITGA3P26006 1051 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 PCSK6P29122 969 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CASP14P31944 242 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 TSPAN7P41732 249 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 STAT6P42226 847 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 PEX5P50542 639 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 DNA2P51530 1060 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 PLK1P53350 603 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SLC16A1P53985 500 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 OR1D5P58170 312 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 NANOS2P60321 138 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CTXN1P60606 82 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SRP54P61011 504 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 TAP2Q03519 686 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SEMA5AQ13591 1074 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CHRNA6Q15825 494 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SMTNL2Q2TAL5 461 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 PRR30Q53SZ7 412 aaPredicted RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ZNF628Q5EBL2 1059 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 VWA2Q5GFL6 755 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 AARS2Q5JTZ9 985 aaKnown RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SPOPLQ6IQ16 392 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ERAP2Q6P179 960 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 MSANTD2Q6P1R3 559 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 HPS6Q86YV9 775 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 APLFQ8IW19 511 aaPredicted RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 RHOT1Q8IXI2 618 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 IQCKQ8N0W5 287 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ANKRD42Q8N9B4 389 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 OR4D9Q8NGE8 314 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 OR2A12Q8NGT7 310 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CXorf40AQ8TE69 158 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 RAB7BQ96AH8 199 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CENPTQ96BT3 561 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 DNAJC19Q96DA6 116 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 RTP4Q96DX8 246 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 STAMBPL1Q96FJ0 436 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 BTN2A3PQ96KV6 586 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 LYZL4Q96KX0 146 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 RPRD1AQ96P16 312 aaPredicted RBP4.83□□□□□ -1.64
SFXN1-202ENST00000421887 SLC2A13Q96QE2 648 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 CTRCQ99895 268 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
SFXN1-202ENST00000421887 FEM1AQ9BSK4 669 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms