RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GPR22Q99680 433 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 HIST1H2AJQ99878 128 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 CTRCQ99895 268 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 H2AFJQ9BTM1 129 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 TRIM54Q9BYV2 358 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 ABCF3Q9NUQ8 709 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 SPATA7Q9P0W8 599 aa15.24■□□□□ 0.03
BRAT1-202ENST00000421712 ZNF839A8K0R7 811 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 POC1B-GALNT4F8VUJ3 575 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 MYO1CO00159 1063 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 POLR1CO15160 346 aaPredicted RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 DXOO77932 396 aaKnown RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 C1QAP02745 245 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 INHBAP08476 426 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 PVRP15151 417 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 NELFEP18615 380 aaKnown RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 SLC5A2P31639 672 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 HSD17B2P37059 387 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 RAB15P59190 212 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 SH3BP2P78314 561 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 MC2RQ01718 297 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 KCNAB1Q14722 419 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 MROH9Q5TGP6 573 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 TMEM207Q6UWW9 146 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 KMT5CQ86Y97 462 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 SYTL1Q8IYJ3 562 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 CARFQ8N187 725 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 LINC01555Q8NAE3 123 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 NAF1Q96HR8 494 aaKnown RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 OR6C1Q96RD1 312 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 ACSS3Q9H6R3 686 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 PARVBQ9HBI1 364 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 ASCL3Q9NQ33 180 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 ADAMTS6Q9UKP5 1117 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 PCDHB11Q9Y5F2 797 aa15.23■□□□□ 0.03
BRAT1-202ENST00000421712 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
BRAT1-202ENST00000421712 ANKRD12Q6UB98 2062 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 A0A0J9YY10 115 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 SLC16A5O15375 505 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 PHGDHO43175 533 aaKnown RBP15.22■□□□□ 0.03
BRAT1-202ENST00000421712 EBLN1P0CF75 366 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 ST6GAL1P15907 406 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
BRAT1-202ENST00000421712 RPA3P35244 121 aaPredicted RBP15.22■□□□□ 0.03
BRAT1-202ENST00000421712 MSH2P43246 934 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 PNLIPRP1P54315 467 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 SP140Q13342 867 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 FASTKQ14296 549 aaKnown RBP15.22■□□□□ 0.03
BRAT1-202ENST00000421712 CYP2A13Q16696 494 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 CYB5D1Q6P9G0 228 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 IGF2-ASQ6U949 168 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 CEACAM20Q6UY09 585 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 FAM20CQ8IXL6 584 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 N4BP2L2Q92802 583 aaPredicted RBP15.22■□□□□ 0.03
BRAT1-202ENST00000421712 SLC41A2Q96JW4 573 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 DCBLD2Q96PD2 775 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 MENTQ9BUN1 341 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 SLC12A9Q9BXP2 914 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 ASPSCR1Q9BZE9 553 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 POPDC3Q9HBV1 291 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 PDE7BQ9NP56 450 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 FBXO8Q9NRD0 319 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 SEMA5BQ9P283 1151 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 DKK4Q9UBT3 224 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 B3GALT1Q9Y5Z6 326 aa15.22■□□□□ 0.03
BRAT1-202ENST00000421712 CDRT15L2A8MXV6 281 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 C9orf172C9J069 976 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 NVLO15381 856 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 TSPAN12O95859 305 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 SLC16A8O95907 504 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 MYBL2P10244 700 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 FOLR1P15328 257 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PEBP1P30086 187 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PCBP4P57723 403 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 RAB10P61026 200 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 ACY1Q03154 408 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 TUBB3Q13509 450 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 BMPR2Q13873 1038 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 ARHGAP19Q14CB8 494 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 SLC5A12Q1EHB4 618 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 THEMIS2Q5TEJ8 643 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 SUSD1Q6UWL2 747 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 TAOK1Q7L7X3 1001 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 RASGRP3Q8IV61 690 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 BMPERQ8N8U9 685 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 KDF1Q8NAX2 398 aaPredicted RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 FBXO15Q8NCQ5 510 aaPredicted RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PPFIBP2Q8ND30 876 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 DENND1AQ8TEH3 1009 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 UBLCP1Q8WVY7 318 aaPredicted RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 SMPDL3AQ92484 453 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 ALKBH8Q96BT7 664 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PDLIM5Q96HC4 596 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 CCDC138Q96M89 665 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms