RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SLC6A19Q695T7 634 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 MRPL14Q6P1L8 145 aaKnown RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 ZNF655Q8N720 491 aaPredicted RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 RBMXL3Q8N7X1 1067 aaKnown RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 CCDC89Q8N998 374 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 LKAAEAR1Q8TD35 194 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 SLAMF7Q9NQ25 335 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 EURLQ9NYK6 297 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 DHCR7Q9UBM7 475 aaKnown RBP16.71■□□□□ 0.27
MSH6-203ENST00000420813 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
MSH6-203ENST00000420813 UTP20O75691 2785 aaKnown RBP16.71■□□□□ 0.26
MSH6-203ENST00000420813 BLACEA4D250 179 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 PEX12O00623 359 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 PRMT5O14744 637 aaPredicted RBP16.7■□□□□ 0.26
MSH6-203ENST00000420813 SLCO2B1O94956 709 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 FKBP9O95302 570 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 CTSBP07858 339 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 MAGP20916 626 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 AOAHP28039 575 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 GCGRP47871 477 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 GRB7Q14451 532 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 TMED2Q15363 201 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 DCAF10Q5QP82 559 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 FHL5Q5TD97 284 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 LINC01555Q8NAE3 123 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 CLEC1AQ8NC01 280 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 OR2L8Q8NGY9 312 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 DENND1AQ8TEH3 1009 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 DLG3Q92796 817 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 NACC2Q96BF6 587 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 PTERQ96BW5 349 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 RAB11FIP5Q9BXF6 653 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 SLC29A3Q9BZD2 475 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 LRRC4CQ9HCJ2 640 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
MSH6-203ENST00000420813 CATSPERZQ9NTU4 200 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 INTS7Q9NVH2 962 aaKnown RBP16.7■□□□□ 0.26
MSH6-203ENST00000420813 IRAK4Q9NWZ3 460 aa16.7■□□□□ 0.26
MSH6-203ENST00000420813 CNTRLQ7Z7A1 2325 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 KRT86O43790 486 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 AGFG2O95081 481 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 ALPPP05187 535 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 ETS1P14921 441 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 ARSFP54793 590 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 SOX8P57073 446 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 SNX1Q13596 522 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 MYBPC3Q14896 1274 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 PCID2Q5JVF3 399 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 DRICH1Q6PGQ1 229 aaPredicted RBP16.69■□□□□ 0.26
MSH6-203ENST00000420813 C4orf22Q6V702 233 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 GAS2L3Q86XJ1 694 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 MPP5Q8N3R9 675 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 FKBP10Q96AY3 582 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 PANX3Q96QZ0 392 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 CHRAC1Q9NRG0 131 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 ENAMQ9NRM1 1142 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 P4HTMQ9NXG6 502 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 MDC1Q14676 2089 aaKnown RBP16.69■□□□□ 0.26
MSH6-203ENST00000420813 HEATR5BQ9P2D3 2071 aa16.69■□□□□ 0.26
MSH6-203ENST00000420813 IQCF5A8MTL0 148 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 AP3B1O00203 1094 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 RASGRF2O14827 1237 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 KPNA5O15131 536 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 CD3EAPO15446 510 aaKnown RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 ONECUT2O95948 504 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 CCNG2Q16589 344 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 ZC3H12BQ5HYM0 836 aaKnown RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 YOD1Q5VVQ6 348 aaPredicted RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 IGFL3Q6UXB1 125 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 PPP1R32Q7Z5V6 425 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 PRUNE1Q86TP1 453 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 LRRC6Q86X45 466 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 MCATQ8IVS2 390 aaKnown RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 FAM20CQ8IXL6 584 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 GALNT16Q8N428 558 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 CFAP61Q8NHU2 1237 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 MFRPQ9BY79 579 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 IL22Q9GZX6 179 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 P2RY12Q9H244 342 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 TREX1Q9NSU2 369 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 MARCH4Q9P2E8 410 aaPredicted RBP16.68■□□□□ 0.26
MSH6-203ENST00000420813 GNPTGQ9UJJ9 305 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 GUCA1BQ9UMX6 200 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 ZKSCAN5Q9Y2L8 839 aa16.68■□□□□ 0.26
MSH6-203ENST00000420813 A0A1B0GX78 115 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 ALBP02768 609 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 UMODP07911 640 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 PIM1P11309 404 aaPredicted RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 RPS3P23396 243 aaKnown RBP eCLIP16.67■□□□□ 0.268e-8■■■□□ 16.4
MSH6-203ENST00000420813 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 RAPSNQ13702 412 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 SLC9A5Q14940 896 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms