RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 NID2Q14112 1375 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 GNG14A0A1W2PPG7 69 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 A0A1W2PPL8 197 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 C17orf102A2RUQ5 167 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CENPXA8MT69 81 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PLD2O14939 933 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TO15178 435 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PROM1O43490 865 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 BUD23O43709 281 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 SNAP91O60641 907 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 FKBP6O75344 327 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 IFNA2P01563 188 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CRHP06850 196 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 KLK3P07288 261 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 IL11P20809 199 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MMP8P22894 467 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CDC25AP30304 524 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 GJC1P36383 396 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CASP3P42574 277 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CSNK1DP48730 415 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 AKR1D1P51857 326 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ERVFC1P60507 584 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 VAMP2P63027 116 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 RBP5P82980 135 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 DEFA6Q01524 100 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PUDPQ08623 228 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZNF844Q08AG5 666 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ILF3Q12906 894 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ITGADQ13349 1161 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MBTPS1Q14703 1052 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZNF846Q147U1 533 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PPP1R3AQ16821 1122 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TM4SF20Q53R12 229 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TOR1AIP1Q5JTV8 583 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CDC73Q6P1J9 531 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MSANTD2Q6P1R3 559 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ADAMTSL4Q6UY14 1074 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TFAP2EQ6VUC0 442 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 USP45Q70EL2 814 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TRMT11Q7Z4G4 463 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZBTB46Q86UZ6 589 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZDHHC13Q8IUH4 622 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 LACC1Q8IV20 430 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 C1orf210Q8IVY1 113 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 KLHL7Q8IXQ5 586 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 SLC25A41Q8N5S1 370 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 AKR7LQ8NHP1 331 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 OR1E3Q8WZA6 343 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 USP7Q93009 1102 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 C18orf25Q96B23 403 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZNF514Q96K75 400 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 C2orf88Q9BSF0 95 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 POTEKPQ9BYX7 375 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 WDR11Q9BZH6 1224 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 BTBD1Q9H0C5 482 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 HDHD2Q9H0R4 259 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CYP3A43Q9HB55 503 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 LRRC4Q9HBW1 653 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TLR9Q9NR96 1032 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CCM2LQ9NUG4 571 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 COQ3Q9NZJ6 369 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TMEM9Q9P0T7 183 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 DNMT3BQ9UBC3 853 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PIN4Q9Y237 131 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CLDN16Q9Y5I7 305 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ST14Q9Y5Y6 855 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 LCTP09848 1927 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PIPSLA2A3N6 862 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MBLAC1A4D2B0 266 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MYADML2A6NDP7 307 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 RFPL4AA6NLU0 287 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 HACD1B0YJ81 288 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TISP43B9A030 160 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 B9A039 149 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 RFPL4AL1F8VTS6 287 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TCAPO15273 167 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 RFPL2O75678 378 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 SCO1O75880 301 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 NOL4O94818 638 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TTLL1O95922 423 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 F9P00740 461 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 IL1BP01584 269 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PROCP04070 461 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 GSTP1P09211 210 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 HNRNPA1P09651 372 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 ZDHHC11BP0C7U3 371 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 LINC00614P0C842 121 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TAL1P17542 331 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 TFE3P19532 575 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 POU1F1P28069 291 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 APOBEC3AP31941 199 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 PITPNBP48739 271 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 NDUFV1P49821 464 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 AFF3P51826 1226 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 RPS26P62854 115 aaKnown RBP4.04□□□□□ -1.76
PTPN22-202ENST00000420377 JAG1P78504 1218 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 MYBPC1Q00872 1141 aa4.04□□□□□ -1.76
PTPN22-202ENST00000420377 CAMK2GQ13555 558 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms