RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 DDA1Q9BW61 102 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 ANKZF1Q9H8Y5 726 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 FBXO8Q9NRD0 319 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 THSD1Q9NS62 852 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 AKAP7Q9P0M2 348 aaPredicted RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 TSR3Q9UJK0 312 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 MTO1Q9Y2Z2 717 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 CACNA1BQ00975 2339 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 A0A1W2PPV9 198 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 PIPSLA2A3N6 862 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 GSAPA4D1B5 854 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 EFCAB7A8K855 629 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 ZBTB11O95625 1053 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-204ENST00000418628 ABHD2P08910 425 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 MSL3P1P0C860 447 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 RGS4P49798 205 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 RAB15P59190 212 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 POU4F1Q01851 419 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 SLMAPQ14BN4 828 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 ARHGAP19Q14CB8 494 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 SLC5A12Q1EHB4 618 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 GRTP1Q5TC63 336 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 ARMC6Q6NXE6 501 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 PPM1NQ8N819 430 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 OR9A1PQ8NGU1 263 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 LINGO1Q96FE5 620 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 CHRNA10Q9GZZ6 450 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 FOXJ2Q9P0K8 574 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 CIDEBQ9UHD4 219 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 ADAMTS6Q9UKP5 1117 aa18.03■□□□□ 0.48
PTCD3-204ENST00000418628 DSPP15924 2871 aaKnown RBP18.03■□□□□ 0.48
PTCD3-204ENST00000418628 HMX2A2RU54 273 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-204ENST00000418628 SLC16A5O15375 505 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 RASSF9O75901 435 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 FAM155BO75949 473 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 C8GP07360 202 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 FAM153BP0C7A2 387 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 ST6GAL1P15907 406 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 RBMS1P29558 406 aaKnown RBP18.02■□□□□ 0.48
PTCD3-204ENST00000418628 PHBP35232 272 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 SEPHS1P49903 392 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 SH3BP2P78314 561 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 ZNF460Q14592 562 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 FAM153CQ494X1 144 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 ANKS6Q68DC2 871 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 CTAGE3PQ8IX95 158 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 LRRC56Q8IYG6 542 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-204ENST00000418628 LMNTD1Q8N9Z9 388 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 ANKRD7Q92527 254 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 TRAPPC9Q96Q05 1148 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 TAAR9Q96RI9 348 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 CYTH2Q99418 400 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 SLC12A9Q9BXP2 914 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 EPB41L4BQ9H329 900 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-204ENST00000418628 IKZF3Q9UKT9 509 aa18.02■□□□□ 0.48
PTCD3-204ENST00000418628 PRAMEF10O60809 474 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 FKBP9O95302 570 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 ACSL3O95573 720 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 SLC5A2P31639 672 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 SPRP35270 261 aaPredicted RBP18.01■□□□□ 0.47
PTCD3-204ENST00000418628 IL2P60568 153 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 HSD11B2P80365 405 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 TTC23LQ6PF05 361 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 FBXO38Q6PIJ6 1188 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 FOXR1Q6PIV2 292 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 SBSNQ6UWP8 590 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 FAM129CQ86XR2 697 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 GSPT2Q8IYD1 628 aaKnown RBP18.01■□□□□ 0.47
PTCD3-204ENST00000418628 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 FGF11Q92914 225 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 USP7Q93009 1102 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 PKP4Q99569 1192 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 SPRY4Q9C004 299 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 APMAPQ9HDC9 416 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 TXNDC16Q9P2K2 825 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 PDE10AQ9Y233 779 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 SSUH2Q9Y2M2 353 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 KLK4Q9Y5K2 254 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 B3GALT1Q9Y5Z6 326 aa18.01■□□□□ 0.47
PTCD3-204ENST00000418628 A0A0J9YY10 115 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 SLC9B1P1A6NJY1 282 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 AGRPO00253 132 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 SLU7O95391 586 aaKnown RBP18■□□□□ 0.47
PTCD3-204ENST00000418628 SLC16A8O95907 504 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 CDH3P22223 829 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 CD82P27701 267 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 IMPA1P29218 277 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 GABRA4P48169 554 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 MAPK10P53779 464 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 PCBP4P57723 403 aaKnown RBP18■□□□□ 0.47
PTCD3-204ENST00000418628 FASTKQ14296 549 aaKnown RBP18■□□□□ 0.47
PTCD3-204ENST00000418628 PHKG1Q16816 387 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 PPP1R3AQ16821 1122 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 UBE2R2Q712K3 238 aaPredicted RBP18■□□□□ 0.47
PTCD3-204ENST00000418628 TRMT10CQ7L0Y3 403 aaKnown RBP18■□□□□ 0.47
PTCD3-204ENST00000418628 TRIM73Q86UV7 250 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 ZNF480Q8WV37 535 aa18■□□□□ 0.47
PTCD3-204ENST00000418628 ANKRD49Q8WVL7 239 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms