RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DNAJA2O60884 412 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PRH1P02810 166 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 THRBP10828 461 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 SNTA1Q13424 505 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PCBP2Q15366 365 aaKnown RBP eCLIP11□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF776Q68DI1 518 aaPredicted RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 FAM47BQ8NA70 645 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 NAXEQ8NCW5 288 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 WDR12Q9GZL7 423 aaKnown RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 GLS2Q9UI32 602 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CHRNA1P02708 482 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CYP27C1Q4G0S4 372 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 SLC30A8Q8IWU4 369 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 GSTCDQ8NEC7 633 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 DIRAS2Q96HU8 199 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 C8orf48Q96LL4 319 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PCDHB18PQ96TA0 734 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 SMURF1Q9HCE7 757 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 ARID1BQ8NFD5 2236 aaPredicted RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PPP1R11O60927 126 aaPredicted RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 MTTPP55157 894 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CDKL1Q00532 357 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 NAPRTQ6XQN6 538 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 AVL9Q8NBF6 648 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 OR4E2Q8NGC2 313 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.65
PTCH1-205ENST00000418258 CHCHD6Q9BRQ6 235 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PCDHGB7Q9Y5F8 929 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 TTC24A2A3L6 582 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MXD1Q05195 221 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 CAND1Q86VP6 1230 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ACDQ96AP0 544 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TBX5Q99593 518 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 CENPMQ9NSP4 180 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 NADKO95544 446 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 CDKN1CP49918 316 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 NRLP54845 237 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TEAD2Q15562 447 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 AAK1Q2M2I8 961 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 SLC10A6Q3KNW5 377 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 NOXRED1Q6NXP6 359 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 KLHL6Q8WZ60 621 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 COL20A1Q9P218 1284 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 B4GALT2O60909 372 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MAGP20916 626 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 PRAMEF14Q5SWL7 426 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ADGRF1Q5T601 910 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 PRAMEF13Q5VWM6 474 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TRABD2AQ86V40 505 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FSTL5Q8N475 847 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 CLEC4CQ8WTT0 213 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FARSBQ9NSD9 589 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 SPATA6Q9NWH7 488 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 C19orf25Q9UFG5 118 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FADS3Q9Y5Q0 445 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 AK5Q9Y6K8 562 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 NPIPA5E9PKD4 350 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 PIP5K1BO14986 540 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 OR3A3P47888 321 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 OR3A2P47893 321 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 SLBPQ14493 270 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 USP30Q70CQ3 517 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF627Q7L945 461 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 SLC9B2Q86UD5 537 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 GIPC3Q8TF64 312 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MIPEPQ99797 713 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 RIOK2Q9BVS4 552 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FAM124BQ9H5Z6 455 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ATXN10Q9UBB4 475 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 NPIPA1Q9UND3 350 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FKBP7Q9Y680 259 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ALPIP09923 528 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 PRPS2P11908 318 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TYRP1P17643 537 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 HNRNPDQ14103 355 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 FASTKD3Q14CZ7 662 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MSANTD1Q6ZTZ1 278 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 LINGO2Q7L985 606 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 AGAP11Q8TF27 550 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MAF1Q9H063 256 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 C1orf109Q9NX04 203 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 DUXAA6NLW8 204 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TBX1O43435 398 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MMP20O60882 483 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 BPNT1O95861 308 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 APOC1P02654 83 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 TYRP14679 529 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 EIF1AXP47813 144 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 CRISP3P54108 245 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 SELENOVP59797 346 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 GANABQ14697 944 aaKnown RBP10.99□□□□□ -0.65
PTCH1-205ENST00000418258 WDR45BQ5MNZ6 344 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 VWA5B1Q5TIE3 1220 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 BRAT1Q6PJG6 821 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 MBOAT1Q6ZNC8 495 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 ZZZ3Q8IYH5 903 aa10.99□□□□□ -0.65
PTCH1-205ENST00000418258 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms