RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 HM13Q8TCT9 377 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSB-204ENST00000417292 NDC1Q9BTX1 674 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 HGH1Q9BTY7 390 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 C10orf88Q9H8K7 445 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 SPHK1Q9NYA1 384 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 HACD3Q9P035 362 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
SSB-204ENST00000417292 ICKQ9UPZ9 632 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSB-204ENST00000417292 PKP3Q9Y446 797 aa13.21□□□□□ -0.29
SSB-204ENST00000417292 EPOP01588 193 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 PTPN3P26045 913 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 PRLHRP49683 370 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 TNFSF10P50591 281 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 BOP1Q14137 746 aaKnown RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 TFDP2Q14188 446 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 SLC1A5Q15758 541 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 MTFR2Q6P444 385 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 XKRXQ6PP77 449 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 COX15Q7KZN9 410 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 ALG3Q92685 438 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 FAM118BQ9BPY3 351 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 SOX17Q9H6I2 414 aaPredicted RBP13.2□□□□□ -0.3
SSB-204ENST00000417292 ASB8Q9H765 288 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 WDR54Q9H977 334 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 COG4Q9H9E3 785 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 IRAK4Q9NWZ3 460 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 FAM153AQ9UHL3 310 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
SSB-204ENST00000417292 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 WISP2O76076 250 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 SRP72O76094 671 aaKnown RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 ONECUT2O95948 504 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 ALBP02768 609 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 ARG2P78540 354 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 INAQ16352 499 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 TTLL10Q6ZVT0 673 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 P3H4Q92791 437 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 OXNAD1Q96HP4 312 aaPredicted RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 SLC26A1Q9H2B4 701 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 MVB12BQ9H7P6 319 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 CTSFQ9UBX1 484 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 PLCL2Q9UPR0 1127 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
SSB-204ENST00000417292 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
SSB-204ENST00000417292 A0A0J9YY10 115 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 C17orf113A0A1B0GUU1 675 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 A0A1B0GX78 115 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 AGAP14A8MT82 685 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 IFRD1O00458 451 aaPredicted RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 NFKB1P19838 968 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 CTNNA2P26232 953 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 CD151P48509 253 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 RWDD2BP57060 319 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 WASHC5Q12768 1159 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 RBBP7Q16576 425 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 SLC5A12Q1EHB4 618 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 PEX26Q7Z412 305 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 PSMF1Q92530 271 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 TFGQ92734 400 aaPredicted RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 MTFMTQ96DP5 389 aaKnown RBP13.18□□□□□ -0.3
SSB-204ENST00000417292 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 FKBPLQ9UIM3 349 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 CACNA1CQ13936 2221 aa13.18□□□□□ -0.3
SSB-204ENST00000417292 TRAV17A0A0B4J275 112 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 F10P00742 488 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 AGAP20933 346 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 PEBP1P30086 187 aaKnown RBP13.17□□□□□ -0.3
SSB-204ENST00000417292 SOX11P35716 441 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 NR2C2P49116 596 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 XIAPP98170 497 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms