RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C17orf64Q86WR6 236 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SMOQ99835 787 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 OR51V1Q9H2C8 321 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PHF24Q9UPV7 400 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DHRS7Q9Y394 339 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 H3BM21 787 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 CCRL2O00421 344 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ACSL4O60488 711 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PRAMEF10O60809 474 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 MTX2O75431 263 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 MMP3P08254 477 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 CPOXP36551 454 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RGS8P57771 180 aaPredicted RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ERVK-8P63133 956 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 B3GNT9Q6UX72 402 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 C14orf80Q86SX3 495 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 POLR2J2Q9GZM3 115 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 AASDHPPTQ9NRN7 309 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 LOC100130705A0A1B0GUX0 176 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 A0A1W2PQ72 361 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 H7C0S8 307 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PLOD2O00469 737 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 NME4O00746 187 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 DFNA5O60443 496 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 FGBP02675 491 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 LAMP2P13473 410 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SMPD1P17405 629 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SDC2P34741 201 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 BMXP51813 675 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 HSPB3Q12988 150 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 STX12Q86Y82 276 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 HJURPQ8NCD3 748 aaPredicted RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF354BQ96LW1 612 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SNX7Q9UNH6 387 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHGA10Q9Y5H3 936 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SCELO95171 688 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RPLP2P05387 115 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 HNMTP50135 292 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RBBP4Q09028 425 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 CAPN13Q6MZZ7 669 aaPredicted RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RAVER1Q8IY67 606 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 FERD3LQ96RJ6 166 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 DHRS4Q9BTZ2 278 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 POLE3Q9NRF9 147 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 FCF1Q9Y324 198 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHB3Q9Y5E6 796 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHGA3Q9Y5H0 932 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 A0A0G2JN53 185 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 SAP18O00422 153 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 CEBPGP53567 150 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 NIPAL4Q0D2K0 466 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 NOL9Q5SY16 702 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 TMEM209Q96SK2 561 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 INTS10Q9NVR2 710 aaKnown RBP12.63□□□□□ -0.39
SCN1B-202ENST00000415950 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 GIT1Q9Y2X7 761 aa12.63□□□□□ -0.39
SCN1B-202ENST00000415950 FAM86C2PA6NEL3 165 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 PSKH1P11801 424 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GABRR2P28476 465 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 OXTRP30559 389 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 CD83Q01151 205 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 SCRN3Q0VDG4 424 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TNFAIP8L2Q6P589 184 aaPredicted RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF366Q8N895 744 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF780BQ9Y6R6 833 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ARL5CA6NH57 179 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 PER2O15055 1255 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 IRAK2O43187 625 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ITGB1P05556 798 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 PGRP06401 933 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GRIA2P42262 883 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 SH3BP2P78314 561 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 SF1Q15637 639 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TIGD6Q17RP2 521 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms