RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FIP1L1Q6UN15 594 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 ZNF782Q6ZMW2 699 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 LILRB2Q8N423 598 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PAPD5Q8NDF8 572 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 ENKURQ8TC29 256 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 AP2M1Q96CW1 435 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 FCRL2Q96LA5 508 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 KCTD15Q96SI1 283 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 TSEN34Q9BSV6 310 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 TTPALQ9BTX7 342 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 BBS2Q9BXC9 721 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 MCCC2Q9HCC0 563 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ING4Q9UNL4 249 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 BAIAP2Q9UQB8 552 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 A8MUA0 341 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 F5H5T6 163 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 IFNA7P01567 189 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 LRG1P02750 347 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ACADMP11310 421 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 HLA-DMAP28067 261 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PSMB4P28070 264 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 GGT5P36269 586 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SLC11A2P49281 568 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ARHGDIAP52565 204 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 RGS1Q08116 209 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SPANXN3Q5MJ09 141 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PIWIL4Q7Z3Z4 852 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 TMCO2Q7Z6W1 182 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 STRA8Q7Z7C7 330 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TAGAPQ8N103 731 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SVOPLQ8N434 492 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 YIPF7Q8N8F6 280 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ELMO1Q92556 727 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TEKT5Q96M29 485 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ZNF558Q96NG5 402 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TRNT1Q96Q11 434 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 SMOQ99835 787 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 IER2Q9BTL4 223 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ITPAQ9BY32 194 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 ACSL5Q9ULC5 683 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 CNTN6Q9UQ52 1028 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 BCLAF3A2AJT9 711 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 NME4O00746 187 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 FAM20BO75063 409 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SUPT7LO94864 414 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 RPLP0P05388 317 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 C2P06681 752 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 MGAT1P26572 445 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 OR1E1P30953 314 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 CTSKP43235 329 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SOX9P48436 509 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SNRPD2P62316 118 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 FPGSQ05932 587 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 EFR3AQ14156 821 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TAZQ16635 292 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TMEM65Q6PI78 240 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ZNF704Q6ZNC4 412 aaPredicted RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 NECAB2Q7Z6G3 386 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 VWA5B2Q8N398 1253 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ZNF540Q8NDQ6 660 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SKA2Q8WVK7 121 aaPredicted RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 AUTS2Q8WXX7 1259 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TMBIM1Q969X1 311 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 MARC2Q969Z3 335 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SGTBQ96EQ0 304 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 PAWRQ96IZ0 340 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 UBXN10Q96LJ8 280 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SAMD11Q96NU1 681 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 SERPINB11Q96P15 392 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 PEBP4Q96S96 227 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ZNF670Q9BS34 389 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ZNF416Q9BWM5 594 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TTLL2Q9BWV7 592 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 BTBD2Q9BX70 525 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 BEX2Q9BXY8 128 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TMEM161AQ9NX61 479 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 GMPR2Q9P2T1 348 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 ERVK-18Q9QC07 812 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 MAN2B2Q9Y2E5 1009 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 PRELID3BQ9Y3B1 194 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 KIAA1217Q5T5P2 1943 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 LOC100130705A0A1B0GUX0 176 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 HNRNPCL2B2RXH8 293 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 CBX4O00257 560 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 GNB5O14775 395 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 MFSD11O43934 449 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 TLR5O60602 858 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ADAMTS4O75173 837 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 PEX14O75381 377 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 FADS2O95864 444 aaKnown RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 EOMESO95936 686 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 APOC1P02654 83 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 ALPLP05186 524 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 PTX3P26022 381 aaPredicted RBP7.66□□□□□ -1.18
SIK3-203ENST00000415541 OXTRP30559 389 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 RYKP34925 604 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 GPR15P49685 360 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 LIMK2P53671 638 aa7.66□□□□□ -1.18
SIK3-203ENST00000415541 FLI1Q01543 452 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms