RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 COPS2P61201 443 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 GRB7Q14451 532 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 PRPSAP1Q14558 356 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 TLR1Q15399 786 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
LIMS2-210ENST00000413578 TTLL10Q6ZVT0 673 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 TAS2R42Q7RTR8 314 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 FAM20CQ8IXL6 584 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 ELMO1Q92556 727 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 PPP1R2P1Q96PQ5 205 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 LHPPQ9H008 270 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
LIMS2-210ENST00000413578 SMARCAL1Q9NZC9 954 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 CDC23Q9UJX2 597 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 PLAGL1Q9UM63 463 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 KLHL20Q9Y2M5 609 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 TDRKHQ9Y2W6 561 aaKnown RBP11.67□□□□□ -0.54
LIMS2-210ENST00000413578 F8P00451 2351 aa11.67□□□□□ -0.54
LIMS2-210ENST00000413578 PDZD2O15018 2839 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ARHGAP10A1A4S6 786 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 FITM1A5D6W6 292 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 MROH6A6NGR9 719 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 DSCR3O14972 297 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ALAS2P22557 587 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 FOXN2P32314 431 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 CTNNA1P35221 906 aaKnown RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 RAB28P51157 221 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 TDGF1P3P51864 188 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 EIF3EP60228 445 aaKnown RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 PLOD1Q02809 727 aaPredicted RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 SP5Q6BEB4 398 aaPredicted RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 NAPRTQ6XQN6 538 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 MCATQ8IVS2 390 aaKnown RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 OR11G2Q8NGC1 345 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 DENND1AQ8TEH3 1009 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 STYXQ8WUJ0 223 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 RELTQ969Z4 430 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 FAM118BQ9BPY3 351 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 FERMT1Q9BQL6 677 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 MESP1Q9BRJ9 268 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 LUC7LQ9NQ29 371 aaKnown RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 CUTCQ9NTM9 273 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 CTSFQ9UBX1 484 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 NXT1Q9UKK6 140 aaKnown RBP11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ZFHX3Q15911 3703 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 ANKRD12Q6UB98 2062 aa11.66□□□□□ -0.54
LIMS2-210ENST00000413578 C2CD3Q4AC94 2353 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 OR51F1A6NGY5 319 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 ISM1B1AKI9 464 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 KLHL18O94889 574 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 FTH1P02794 183 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 TPH1P17752 444 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 MCM3P25205 808 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 SOX11P35716 441 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 CDC16Q13042 620 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 MFAP5Q13361 173 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 BRD3Q15059 726 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 TUBB8Q3ZCM7 444 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 YOD1Q5VVQ6 348 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-210ENST00000413578 FCRL6Q6DN72 434 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 DARS2Q6PI48 645 aaKnown RBP11.65□□□□□ -0.54
LIMS2-210ENST00000413578 MCEMP1Q8IX19 187 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 LMNTD1Q8N9Z9 388 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 OSBPL8Q9BZF1 889 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 SOX17Q9H6I2 414 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-210ENST00000413578 EPS8L2Q9H6S3 715 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIMS2-210ENST00000413578 PCDHA3Q9Y5H8 950 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
LIMS2-210ENST00000413578 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 HEATR9A2RTY3 570 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 PCDH17O14917 1159 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 PRICKLE3O43900 615 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 OR1I1O60431 355 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 GPC4O75487 556 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 MED26O95402 600 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 METTL18O95568 372 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 S1PR4O95977 384 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 PIM1P11309 404 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 CD9P21926 228 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 CCR7P32248 378 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 POU6F1Q14863 301 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 PARP6Q2NL67 630 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 DNAJC21Q5F1R6 531 aaKnown RBP11.64□□□□□ -0.55
LIMS2-210ENST00000413578 CCDC181Q5TID7 509 aa11.64□□□□□ -0.55
LIMS2-210ENST00000413578 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms