RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SKA3Q8IX90 412 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 CBR4Q8N4T8 237 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 TM9SF4Q92544 642 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 LRRC58Q96CX6 371 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 FOLH1BQ9HBA9 442 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ASB4Q9Y574 426 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 AGAP5A6NIR3 686 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 LINC00032P0C843 101 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ETFAP13804 333 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ACTBP60709 375 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ACTG1P63261 375 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 HSD11B2P80365 405 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GTF2BQ00403 316 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 C2orf80Q0P641 193 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 DBPQ10586 325 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 MELKQ14680 651 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 PTPN20Q4JDL3 420 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ARL9Q6T311 187 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 PLEKHG7Q6ZR37 379 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 SSX6Q7RTT6 188 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 WDR53Q7Z5U6 358 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 RASGEF1CQ8N431 466 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ZBTB8BQ8NAP8 495 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 TBC1D15Q8TC07 691 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 WFIKKN2Q8TEU8 576 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 EDEM1Q92611 657 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 SEMA4DQ92854 862 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 TAAR1Q96RJ0 339 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GLIS2Q9BZE0 524 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 POLR2J2Q9GZM3 115 aaKnown RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 OSBPL2Q9H1P3 480 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 EVA1AQ9H8M9 152 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 TAS2R10Q9NYW0 307 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 UQCRC1P31930 480 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 PBX3P40426 434 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ERVK-8P63133 956 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 MRPS5P82675 430 aaKnown RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GTF2H2Q13888 395 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 PTCHD3Q3KNS1 767 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 SLC36A3Q495N2 470 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GTF2H2CQ6P1K8 395 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 SCUBE3Q8IX30 993 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GSTCDQ8NEC7 633 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ZNF431Q8TF32 576 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 MALSU1Q96EH3 234 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 OR14A2Q96R54 314 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 GFM1Q96RP9 751 aaKnown RBP7.25□□□□□ -1.25
PTPN3-203ENST00000412145 PCDHB18PQ96TA0 734 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 CDC6Q99741 560 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 SH2D3AQ9BRG2 576 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 MAGEH1Q9H213 219 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 C1orf21Q9H246 121 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 TPK1Q9H3S4 243 aa7.25□□□□□ -1.25
PTPN3-203ENST00000412145 ANKRD33BA6NCL7 494 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 CCDC85CA6NKD9 419 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 H0Y858 1186 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 AP2A1O95782 977 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 IL7RP16871 459 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 RHOQP17081 205 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 RARRES1P49788 294 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SEPHS1P49903 392 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 GALK1P51570 392 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 KCNJ2P63252 427 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 KCNC3Q14003 757 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 CPSF6Q16630 551 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN3-203ENST00000412145 GLT8D1Q68CQ7 371 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 RTL6Q6ICC9 239 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 TREML1Q86YW5 311 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 NKD2Q969F2 451 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SLC41A3Q96GZ6 507 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 FUZQ9BT04 418 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 CCDC106Q9BWC9 280 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SPATC1LQ9H0A9 340 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 FBXO6Q9NRD1 293 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-203ENST00000412145 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN3-203ENST00000412145 FLRT1Q9NZU1 646 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 MADDQ8WXG6 1647 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 FAM237AA0A1B0GTK4 181 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 HPRP00739 348 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 BCKDHAP12694 445 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 MZT1Q08AG7 82 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SP140Q13342 867 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 GPR33Q49SQ1 333 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 ATAT1Q5SQI0 421 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SLC22A10Q63ZE4 541 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 REP15Q6BDI9 236 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 ZNF627Q7L945 461 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 ZNF367Q7RTV3 350 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SETD6Q8TBK2 473 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SENP8Q96LD8 212 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SLC5A7Q9GZV3 580 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 CDT1Q9H211 546 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SPTLC1O15269 473 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 SLC7A4O43246 635 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 MAGEA3P43357 314 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 NCS1P62166 190 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 PSD4Q8NDX1 1056 aa7.24□□□□□ -1.25
PTPN3-203ENST00000412145 OR7G2Q8NG99 324 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms