RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ASCL2Q99929 193 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF559Q9BR84 538 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 TRMOQ9BU70 441 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 LHPPQ9H008 270 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 MAP6D1Q9H9H5 199 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 MKKSQ9NPJ1 570 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 SERINC1Q9NRX5 453 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 NMRK1Q9NWW6 199 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 PTGFRNQ9P2B2 879 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 RCOR1Q9UKL0 485 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 B3GALT5Q9Y2C3 310 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 HBS1LQ9Y450 684 aaKnown RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-204ENST00000412061 STON1Q9Y6Q2 735 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 U3KQV3 271 aa4.35□□□□□ -1.71
BRCA1-204ENST00000412061 UBE4BO95155 1302 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 A0A1W2PPC1 479 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 EME2A4GXA9 379 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 F8WDY8 70 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 H0YC42 278 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PLK4O00444 970 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 E2F3O00716 465 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MDM4O15151 490 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SLC16A5O15375 505 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CLDN3O15551 220 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF217O75362 1048 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MTX2O75431 263 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SPAG6O75602 509 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 LUC7L3O95232 432 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CLDN7O95471 211 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PLGP00747 810 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 IFNA2P01563 188 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PCCBP05166 539 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PGK2P07205 417 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CBSLP0DN79 551 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GLRA2P23416 452 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CBSP35520 551 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 NPBWR1P48145 328 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TRPC1P48995 793 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 HNRNPFP52597 415 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MTTPP55157 894 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CDH12P55289 794 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 EGR4Q05215 589 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PPP1R8Q12972 351 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 IFT88Q13099 833 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TMED1Q13445 227 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GPM6BQ13491 265 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SNX1Q13596 522 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CUL2Q13617 745 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GIT2Q14161 759 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SRSF7Q16629 238 aaKnown RBP eCLIP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 FAM174BQ3ZCQ3 159 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 Q4G0T1 1027 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 ATAD3BQ5T9A4 648 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 METTL2BQ6P1Q9 378 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM71Q6P5X7 295 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TPRG1Q6ZUI0 275 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PHLDB2Q86SQ0 1253 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CUZD1Q86UP6 607 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GPSM1Q86YR5 675 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 RBFAQ8N0V3 343 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 AMER3Q8N944 861 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 KIAA0895Q8NCT3 520 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 OR2AJ1Q8NGZ0 328 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM174Q8WUU8 243 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SELENOMQ8WWX9 145 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 ADAMTS14Q8WXS8 1223 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 ERGIC1Q969X5 290 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 FAM46BQ96A09 425 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MOB3AQ96BX8 217 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 COQ8BQ96D53 544 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CCDC51Q96ER9 411 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CFAP36Q96G28 342 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 METTL2AQ96IZ6 378 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TCEANC2Q96MN5 208 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GFI1Q99684 422 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 FNDC11Q9BVV2 318 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 MOV10L1Q9BXT6 1211 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 KLHL31Q9H511 634 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TFB2MQ9H5Q4 396 aaKnown RBP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PPP1R3EQ9H7J1 279 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 ECT2Q9H8V3 914 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GORASP2Q9H8Y8 452 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CYSLTR2Q9NS75 346 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.34□□□□□ -1.71
BRCA1-204ENST00000412061 CLIP2Q9UDT6 1046 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 GPR132Q9UNW8 380 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 TMED5Q9Y3A6 229 aa4.34□□□□□ -1.71
BRCA1-204ENST00000412061 NSD2O96028 1365 aa4.34□□□□□ -1.72
BRCA1-204ENST00000412061 A0A087WZY1 265 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MACROD2A1Z1Q3 448 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 CTAGE15A4D2H0 777 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TMEM189-UBE2V1I3L0A0 370 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 J3QR06 171 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MAGEB3O15480 346 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 KRT6BP04259 564 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 OR2T7P0C7T2 308 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms