RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RIPOR1Q6ZS17 1223 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 TRIM46Q7Z4K8 759 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 C11orf96Q7Z7L8 435 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 L3MBTL4Q8NA19 623 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 RPLP0P6Q8NHW5 317 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 GANCQ8TET4 914 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 TSPEARQ8WU66 669 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 USP7Q93009 1102 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 PPP3R2Q96LZ3 170 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 NELL2Q99435 816 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 C1QTNF2Q9BXJ5 285 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 TEX101Q9BY14 249 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 ACTR8Q9H981 624 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 KLQ9UEF7 1012 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 CCL27Q9Y4X3 112 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.22
LIMS2-206ENST00000409754 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 GPR89AB7ZAQ6 455 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 KRT6AP02538 564 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 KRT6BP04259 564 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 GPR89BP0CG08 455 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 TRIM23P36406 574 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 BDKRB1P46663 353 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 KRT6CP48668 564 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 DIO3P55073 304 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 RPA4Q13156 261 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 FGL2Q14314 439 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 NR6A1Q15406 480 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 CRTC3Q6UUV7 619 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 FNDC5Q8NAU1 212 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 TP53I13Q8NBR0 393 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-206ENST00000409754 ATG10Q9H0Y0 220 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 STOX2Q9P2F5 926 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-206ENST00000409754 SLC22A14Q9Y267 594 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 NDUFAF1Q9Y375 327 aa13.7□□□□□ -0.22
LIMS2-206ENST00000409754 TRPM6Q9BX84 2022 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 CHURC1-FNTBB4DL54 471 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 MRASO14807 208 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 FFAR3O14843 346 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 GPR42O15529 346 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 UGDHO60701 494 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 PDE5AO76074 875 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 C1orf105O95561 183 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 ITPKAP23677 461 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 NME5P56597 212 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 PCDH1Q08174 1060 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 SGCGQ13326 291 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 IRF4Q15306 451 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 TMEM259Q4ZIN3 620 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 COQ5Q5HYK3 327 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 AGTRAPQ6RW13 159 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 OXR1Q8N573 874 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 OR56A3Q8NH54 315 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 OR14C36Q8NHC7 312 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 STMN2Q93045 179 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 PYCR2Q96C36 320 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 CDRT15Q96T59 188 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 PKP4Q99569 1192 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 WDR26Q9H7D7 661 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
LIMS2-206ENST00000409754 ZNF490Q9ULM2 529 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-206ENST00000409754 FZD4Q9ULV1 537 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 SNX6Q9UNH7 406 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
LIMS2-206ENST00000409754 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
LIMS2-206ENST00000409754 A0A1W2PQU0 124 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 KLHL33A6NCF5 533 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 KRT87PA6NCN2 255 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 K7ESF4 209 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 NR5A2O00482 541 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 PSMG1O95456 288 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 PAK4O96013 591 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-206ENST00000409754 ACADLP28330 430 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 IMPA1P29218 277 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 ADPRHP54922 357 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 PSME3P61289 254 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 MAD2L1Q13257 205 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-206ENST00000409754 LRRC32Q14392 662 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 NFE2L1Q14494 772 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 INPP5AQ14642 412 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 AP5B1Q2VPB7 878 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 CCSMST1Q4G0I0 132 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 DOK6Q6PKX4 331 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 UNC5DQ6UXZ4 953 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 USP30Q70CQ3 517 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 KBTBD6Q86V97 674 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 THOC6Q86W42 341 aaKnown RBP13.68□□□□□ -0.22
LIMS2-206ENST00000409754 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-206ENST00000409754 HPS6Q86YV9 775 aa13.68□□□□□ -0.22
LIMS2-206ENST00000409754 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms