RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HTR6P50406 440 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 TBPL1P62380 186 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 CTBSQ01459 385 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 KRT33BQ14525 404 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 DCUN1D3Q8IWE4 304 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 OR5K2Q8NHB8 316 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MAGEC3Q8TD91 643 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MTFMTQ96DP5 389 aaKnown RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SPACA7Q96KW9 195 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 ORAI3Q9BRQ5 295 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 ARL8BQ9NVJ2 186 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 TRBV23OR9-2A0A075B6M9 112 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 PRAMEF33A0A0G2JMD5 474 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 KLHL33A6NCF5 533 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 ENO1P06733 434 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 BCKDHBP21953 392 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 ACTR1BP42025 376 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 HALP42357 657 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 INHBCP55103 352 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 ACTR1AP61163 376 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 BNIP1Q12981 228 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 METTL2BQ6P1Q9 378 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 IL27RAQ6UWB1 636 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TREML1Q86YW5 311 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 FBXO15Q8NCQ5 510 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 CEP70Q8NHQ1 597 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 RAD51AP1Q96B01 352 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TUBGCP3Q96CW5 907 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 KLHDC7BQ96G42 594 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 MAELQ96JY0 434 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 HSPA12BQ96MM6 686 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TRIT1Q9H3H1 467 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TCEAL2Q9H3H9 227 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 AKTIPQ9H8T0 292 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 SCHIP1Q9P0W5 487 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TBC1D29Q9UFV1 150 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
CHMP3-204ENST00000409727 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
CHMP3-204ENST00000409727 E7EQ34 232 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 TNFRSF10CO14798 259 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CLDN9O95484 217 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 EML2O95834 649 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 RPN2P04844 631 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 EBLN1P0CF75 366 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 SCTRP47872 440 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CPA2P48052 419 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PNLIPRP1P54315 467 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 SIGLEC14Q08ET2 396 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CDC16Q13042 620 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 ABRAXAS2Q15018 415 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 UAP1L1Q3KQV9 507 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 USP39Q53GS9 565 aaKnown RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 THEMIS2Q5TEJ8 643 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 OR56A3Q8NH54 315 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 NTMT1Q9BV86 223 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 NUSAP1Q9BXS6 441 aaKnown RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 FARSBQ9NSD9 589 aaKnown RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 POLG2Q9UHN1 485 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 KLF15Q9UIH9 416 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 SLC12A4Q9UP95 1085 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PRAMEF4O60810 478 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PEX11AO75192 247 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CD27P26842 260 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 EIF2B5Q13144 721 aaKnown RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CHIT1Q13231 466 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 FZD2Q14332 565 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 GRB7Q14451 532 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 LACTB2Q53H82 288 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 XKR6Q5GH73 641 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 PRAMEF9Q5VWM5 478 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 CAPN13Q6MZZ7 669 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-204ENST00000409727 OR2T11Q8NH01 316 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 ACAT2Q9BWD1 397 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 XKR8Q9H6D3 395 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 DLGAP2Q9P1A6 1054 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
CHMP3-204ENST00000409727 SPTY2D1-AS1A0A0U1RR47 76 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 PRR19A6NJB7 356 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 E7ENX8 843 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 UBDO15205 165 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 KCNJ13O60928 360 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 TNFP01375 233 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms