RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CEP44Q9C0F1 390 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 EPB41L4BQ9H329 900 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 HSFX1Q9UBD0 423 aa11.12□□□□□ -0.63
SNX13-202ENST00000409604 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 A8MUI8 341 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 NT5EP21589 574 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CENPAP49450 140 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 IDH3AP50213 366 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 DIO3P55073 304 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PTSQ03393 145 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CAMK1Q14012 370 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 IRF4Q15306 451 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 GOLGA7Q7Z5G4 137 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 GJD3Q8N144 294 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 LPGAT1Q92604 370 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PTERQ96BW5 349 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 GAL3ST4Q96RP7 486 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 C17orf62Q9BQA9 187 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CD248Q9HCU0 757 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 HS3ST2Q9Y278 367 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 IRAK3Q9Y616 596 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CHUKO15111 745 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 KERAO60938 352 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 C8GP07360 202 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PVRP15151 417 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PRDX3P30048 256 aaKnown RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 TLX1P31314 330 aaPredicted RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 LKAAEAR1Q8TD35 194 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 VPS4AQ9UN37 437 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 LOC285095A0A1B0GVY8 99 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CFAP73A6NFT4 308 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 WASH4PA8MWX3 477 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 MYF5P13349 255 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PTNP21246 168 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CCR7P32248 378 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 HPCAL1P37235 193 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 GPAT3Q53EU6 434 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 KLHL35Q6PF15 583 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 TRAM1L1Q8N609 369 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PATE1Q8WXA2 126 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 NSMCE2Q96MF7 247 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 TMEM168Q9H0V1 697 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 AKTIPQ9H8T0 292 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 ADAP2Q9NPF8 381 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PSME2Q9UL46 239 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PEX1O43933 1283 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 NOL3O60936 208 aaKnown RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 C1SP09871 688 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 IMPDH1P20839 514 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PRKAA2P54646 552 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 PSME3P61289 254 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 OLR1P78380 273 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CHRNB3Q05901 458 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CDKN3Q16667 212 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 FBXO43Q4G163 708 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 TBCELQ5QJ74 424 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 TMEM215Q68D42 235 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 RDH11Q8TC12 318 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 ASB2Q96Q27 587 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 BTBD10Q9BSF8 475 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 MBNL1Q9NR56 388 aaKnown RBP11.11□□□□□ -0.63
SNX13-202ENST00000409604 C5AR2Q9P296 337 aa11.11□□□□□ -0.63
SNX13-202ENST00000409604 IGLV3-10A0A075B6K4 115 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 DYRK3O43781 588 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 CD1DP15813 335 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 NCK1P16333 377 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 PSMB5P28074 263 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 HOXA9P31269 272 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 RPS13P62277 151 aaKnown RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 PTGR1Q14914 329 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 TAZQ16635 292 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 WSCD2Q2TBF2 565 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 FGD3Q5JSP0 725 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 MANEALQ5VSG8 457 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 TRIM40Q6P9F5 258 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 AMIGO2Q86SJ2 522 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 LRIG1Q96JA1 1093 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 GSDMCQ9BYG8 508 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 C6orf106Q9H6K1 298 aaPredicted RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 NOP53Q9NZM5 478 aaKnown RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 EPN2O95208 641 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 SLC35G6P0C7Q6 338 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 HNRNPA2B1P22626 353 aaKnown RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 ITGB7P26010 798 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 MTPNP58546 118 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 ADAM15Q13444 863 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 CPTPQ5TA50 214 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 ALKBH2Q6NS38 261 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 LPCAT2Q7L5N7 544 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms