RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 NELFEP18615 380 aaKnown RBP19.63■□□□□ 0.73
PTCD3-202ENST00000409326 CYP2A7P20853 494 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 CDH3P22223 829 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 SEPHS1P49903 392 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 RAB10P61026 200 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 CYP4F3Q08477 520 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 ARHGAP19Q14CB8 494 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 CYP2A13Q16696 494 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 WDR93Q6P2C0 686 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 BMPERQ8N8U9 685 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 FLVCR1-AS1Q8TAF5 88 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 MDM1Q8TC05 714 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 SLC41A2Q96JW4 573 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 PPM1MQ96MI6 270 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 SLC46A1Q96NT5 459 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 OR2A14Q96R47 310 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 PAFAH2Q99487 392 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 EPB41L4BQ9H329 900 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 PARVBQ9HBI1 364 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 ASCL3Q9NQ33 180 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 OCIAD1Q9NX40 245 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 SIDT1Q9NXL6 827 aaKnown RBP19.63■□□□□ 0.73
PTCD3-202ENST00000409326 IGF2RP11717 2491 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 TPRP12270 2363 aaKnown RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ISM1B1AKI9 464 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 B4E171 279 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 PHGDHO43175 533 aaKnown RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 TNFSF15O95150 251 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ZBTB11O95625 1053 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 RBMS1P29558 406 aaKnown RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 HSD17B2P37059 387 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ETV5P41161 510 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 TSPAN7P41732 249 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 SLC5A12Q1EHB4 618 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ERCC6LQ2NKX8 1250 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 TAX1BP1Q86VP1 789 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 FAM129CQ86XR2 697 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 C2orf73Q8N5S3 287 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 LMNTD1Q8N9Z9 388 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 MCOLN3Q8TDD5 553 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ANKRD49Q8WVL7 239 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 SLC22A18Q96BI1 424 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 CCDC86Q9H6F5 360 aaKnown RBP19.62■□□□□ 0.73
PTCD3-202ENST00000409326 PDE10AQ9Y233 779 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 IKBKGQ9Y6K9 419 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 HEATR5BQ9P2D3 2071 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ACACBO00763 2458 aa19.62■□□□□ 0.73
PTCD3-202ENST00000409326 ACACAQ13085 2346 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 EXOC1LA0A1B0GW35 172 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 HMX2A2RU54 273 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 ZNF839A8K0R7 811 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 CDRT15L2A8MXV6 281 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 SLC16A8O95907 504 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 SYF2O95926 243 aaKnown RBP19.61■□□□□ 0.73
PTCD3-202ENST00000409326 CAPNS1P04632 268 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 MSH2P43246 934 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 MAPK10P53779 464 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 PNLIPRP1P54315 467 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 BMPR2Q13873 1038 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 SLC29A2Q14542 456 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 PHKG1Q16816 387 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 MROH9Q5TGP6 573 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 FBXO38Q6PIJ6 1188 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 CMC1Q7Z7K0 106 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 ZNF578Q96N58 590 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-202ENST00000409326 DERL2Q9GZP9 239 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 ZNF180Q9UJW8 692 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 IKZF3Q9UKT9 509 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 BTRCQ9Y297 605 aa19.61■□□□□ 0.73
PTCD3-202ENST00000409326 APC2O95996 2303 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 A0A0J9YY10 115 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 TMEM8BA6NDV4 472 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 SLC9B1P1A6NJY1 282 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 POC1B-GALNT4F8VUJ3 575 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 PRICKLE3O43900 615 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-202ENST00000409326 ENO2P09104 434 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-202ENST00000409326 ST6GAL1P15907 406 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 CRABP2P29373 138 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 SERPINB9P50453 376 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 RAB15P59190 212 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 ERVPABLB-1P60509 514 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 HSD11B2P80365 405 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 MC2RQ01718 297 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 FASTKQ14296 549 aaKnown RBP19.6■□□□□ 0.73
PTCD3-202ENST00000409326 TBC1D25Q3MII6 688 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 SBSNQ6UWP8 590 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 RAPH1Q70E73 1250 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 TAOK1Q7L7X3 1001 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 CLEC14AQ86T13 490 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 D2HGDHQ8N465 521 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 ZNF480Q8WV37 535 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 DCAKDQ8WVC6 231 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 CCDC138Q96M89 665 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 TRAPPC9Q96Q05 1148 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 DHRS4Q9BTZ2 278 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 B3GNT4Q9C0J1 378 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 FBXO8Q9NRD0 319 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 THSD1Q9NS62 852 aa19.6■□□□□ 0.73
PTCD3-202ENST00000409326 NOVA2Q9UNW9 492 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms