RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 FLVCR1-AS1Q8TAF5 88 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 CD200R1Q8TD46 325 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 PYROXD1Q8WU10 500 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 SLC22A18Q96BI1 424 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 SAYSD1Q9NPB0 183 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 TAS2R13Q9NYV9 303 aa17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 TRMT6Q9UJA5 497 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-206ENST00000409141 EIF3HO15372 352 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 PSIP1O75475 530 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 TIAF1O95411 115 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 CATP04040 527 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 MPC1LP0DKB6 136 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 ENO3P13929 434 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 PEBP1P30086 187 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 CAV1Q03135 178 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 MGAT5Q09328 741 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 ABHD18Q0P651 414 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 MAP7Q14244 749 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 SLC5A12Q1EHB4 618 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 C8orf74Q6P047 294 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 GALNT7Q86SF2 657 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 TAX1BP1Q86VP1 789 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 SPNS2Q8IVW8 549 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 PALM2Q8IXS6 379 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 ZSCAN1Q8NBB4 408 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 TCTN2Q96GX1 697 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 LRRC1Q9BTT6 524 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 TWSG1Q9GZX9 223 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 SYTL2Q9HCH5 934 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 FAM114A2Q9NRY5 505 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 CFAP47Q6ZTR5 3102 aa17.32■□□□□ 0.36
PDLIM2-206ENST00000409141 KRT87PA6NCN2 255 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 ARHGEF33A8MVX0 844 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 NTRK1P04629 796 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CCNYL3P0C7X3 344 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CBSLP0DN79 551 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 MCM3P25205 808 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CBSP35520 551 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SLC7A5Q01650 507 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 TRADDQ15628 312 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 RBM20Q5T481 1227 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CAPN12Q6ZSI9 719 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CDHR3Q6ZTQ4 885 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 TMEM126BQ8IUX1 230 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CPNE9Q8IYJ1 553 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 C19orf47Q8N9M1 422 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SNRNP27Q8WVK2 155 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 N4BP2L2Q92802 583 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 KIAA1143Q96AT1 154 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SERTAD3Q9UJW9 196 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 LOC101059948A0A1B0GTJ6 334 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 TMEM150CB9EJG8 249 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SCRG1O75711 98 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 MT-ND3P03897 115 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 LIFP15018 202 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CDKN2DP55273 166 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 TIAL1Q01085 375 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SF1Q15637 639 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 ZIC1Q15915 447 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 CYHR1Q6ZMK1 362 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 FAM20CQ8IXL6 584 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 GPATCH11Q8N954 259 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 MNS1Q8NEH6 495 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 OR9A1PQ8NGU1 263 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 OR1L3Q8NH93 324 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 FBXO25Q8TCJ0 367 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 ASB11Q8WXH4 323 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 GPN2Q9H9Y4 310 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 FAM60AQ9NP50 221 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 SPATA7Q9P0W8 599 aa17.31■□□□□ 0.36
PDLIM2-206ENST00000409141 NBEAQ8NFP9 2946 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 EIF3FO00303 357 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 ZBTB14O43829 449 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 MSL3P1P0C860 447 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 WT1P19544 449 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 STAT5AP42229 794 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 RGS4P49798 205 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 PAQR3Q6TCH7 311 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 PIWIL4Q7Z3Z4 852 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 STRA8Q7Z7C7 330 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 KIF18AQ8NI77 898 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 EEF1AKMT1Q8WVE0 214 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 EFHD1Q9BUP0 239 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 PADI1Q9ULC6 663 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 CORO1CQ9ULV4 474 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 KLHL20Q9Y2M5 609 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 VWA7Q9Y334 891 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 PCDHGA4Q9Y5G9 962 aa17.3■□□□□ 0.36
PDLIM2-206ENST00000409141 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
PDLIM2-206ENST00000409141 MYO1CO00159 1063 aa17.29■□□□□ 0.36
PDLIM2-206ENST00000409141 SYF2O95926 243 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-206ENST00000409141 MAGP20916 626 aa17.29■□□□□ 0.36
PDLIM2-206ENST00000409141 OAS2P29728 719 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-206ENST00000409141 SSTR1P30872 391 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms