RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 C5P01031 1676 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 IGKV6-21A0A0C4DH24 114 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 A0A1B0GW55 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 IRGMA1A4Y4 181 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PRORSD1PA6NEY8 169 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HIDE1A8MVS5 230 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L2P0CJ85 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L3P0CJ86 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L4P0CJ87 422 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L5P0CJ88 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L6P0CJ89 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4L7P0CJ90 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF823P16415 610 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CD70P32970 193 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 SRP54P61011 504 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PAFAH1B3Q15102 231 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ZBTB6Q15916 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 FBXO48Q5FWF7 155 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 FAM78AQ5JUQ0 283 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF648Q5T619 568 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ZFP1Q6P2D0 407 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ARHGAP36Q6ZRI8 547 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 KCTD8Q6ZWB6 473 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 TAS1R1Q7RTX1 841 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ASPGQ86U10 573 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PIM3Q86V86 326 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 EIF1ADQ8N9N8 165 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 OR6Y1Q8NGX8 325 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 MAGEE2Q8TD90 523 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 RELTQ969Z4 430 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HSPA12BQ96MM6 686 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 LENG8Q96PV6 779 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 SLC2A13Q96QE2 648 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 AGAP2Q99490 1192 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 GRIP2Q9C0E4 1043 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HHATLQ9HCP6 504 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 SIX2Q9NPC8 291 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 MKKSQ9NPJ1 570 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 C1orf109Q9NX04 203 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 THUMPD1Q9NXG2 353 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CKLFQ9UBR5 152 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 DUX4Q9UBX2 424 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PPM1HQ9ULR3 514 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 SORCS3Q9UPU3 1222 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HCFC2Q9Y5Z7 792 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ATP6AP2A0A1C7CYW4 349 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CDC40O60508 579 aaKnown RBP eCLIP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ATP6AP2O75787 350 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 TGFB1P01137 390 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 UBTFL6P0CB48 400 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 IL7RP16871 459 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF37AP17032 561 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CDKN1CP49918 316 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ITGA1P56199 1179 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 RPS3AP61247 264 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 GSTM4Q03013 218 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HSF2Q03933 536 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 RBPJQ06330 500 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 TOP3AQ13472 1001 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 NPY5RQ15761 445 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CARTPTQ16568 116 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PLEKHS1Q5SXH7 462 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 LCN1P1Q5VSP4 162 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 C1orf189Q5VU69 101 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 Q6ZSR6 202 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 APCDD1Q8J025 514 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 RASGEF1CQ8N431 466 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ARL14Q8N4G2 192 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 EID2Q8N6I1 236 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 HORMAD2Q8N7B1 307 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 RNF148Q8N7C7 305 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 SLC44A1Q8WWI5 657 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 NPY6RQ99463 290 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 MAP3K3Q99759 626 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ANKZF1Q9H8Y5 726 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 KCNK13Q9HB14 408 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 ARMCX1Q9P291 453 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 CNOT6Q9ULM6 557 aaKnown RBP4.9□□□□□ -1.62
SCN3A-203ENST00000409101 PCDHGB5Q9Y5G0 923 aa4.9□□□□□ -1.62
SCN3A-203ENST00000409101 A0A0J9YYE9 177 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 ARHGEF33A8MVX0 844 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 H3BNC9 293 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 KIF1CO43896 1103 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 NIPSNAP2O75323 286 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 FAM155BO75949 473 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RENP00797 406 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 SHBGP04278 402 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 IRAK1P51617 712 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 NRG1Q02297 640 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 GALNT2Q10471 571 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TRMT5Q32P41 509 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CEP78Q5JTW2 689 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 NCEH1Q6PIU2 408 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CRELD2Q6UXH1 353 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 GPRIN1Q7Z2K8 1008 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 AMIGO1Q86WK6 493 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RNF168Q8IYW5 571 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 FAM174AQ8TBP5 190 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms