RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SLC6A15Q9H2J7 730 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 SMURF1Q9HCE7 757 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 PCDHGB6Q9Y5F9 930 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 DIO3P55073 304 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 ASB12Q8WXK4 309 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 BRD9Q9H8M2 597 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 NENFQ9UMX5 172 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 A0A0X1KG70 313 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 WNT10BO00744 389 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 STX16O14662 325 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 G6PDP11413 515 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 SEMA3AQ14563 771 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 SWI5Q1ZZU3 235 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 C16orf59Q7L2K0 433 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 BARD1Q99728 777 aaKnown RBP17.3■□□□□ 0.36
SMPD4-202ENST00000409031 DUSP26Q9BV47 211 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 PDZD7Q9H5P4 517 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF541Q9H0D2 1346 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CPOXP36551 454 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CLCN4P51793 760 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 ST3GAL4Q11206 333 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 PIWIL3Q7Z3Z3 882 aaKnown RBP17.3■□□□□ 0.36
SMPD4-202ENST00000409031 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF433Q8N7K0 673 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CLEC4CQ8WTT0 213 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 TWNKQ96RR1 684 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 ANXA3P12429 323 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 LCN1P31025 176 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 SMIM28A0A1B0GU29 152 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 TEX28O15482 410 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 CD47Q08722 323 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 C2orf80Q0P641 193 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 TMEM135Q86UB9 458 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 SIDT2Q8NBJ9 832 aaKnown RBP17.3■□□□□ 0.36
SMPD4-202ENST00000409031 BCO2Q9BYV7 579 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 GIMAP2Q9UG22 337 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 PCDHB7Q9Y5E2 793 aa17.3■□□□□ 0.36
SMPD4-202ENST00000409031 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ALDH1A2O94788 518 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ENGP17813 658 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ADORA2AP29274 412 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 XKP51811 444 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CARM1Q86X55 608 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 C2CD4AQ8NCU7 369 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 TBC1D15Q8TC07 691 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 COPS5Q92905 334 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 TM6SF2Q9BZW4 377 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 UPB1Q9UBR1 384 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 NRCAMQ92823 1304 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ISM1B1AKI9 464 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 OR6A2O95222 327 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CTPS1P17812 591 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SCNN1GP51170 649 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 HMGCS1Q01581 520 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SLC9A5Q14940 896 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 C10orf62Q5T681 223 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 DESI1Q6ICB0 168 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 BLOC1S3Q6QNY0 202 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 FAM180AQ6UWF9 173 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 RPS27LQ71UM5 84 aaKnown RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 TAC4Q86UU9 113 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SLC30A8Q8IWU4 369 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 XAGE5Q8WWM1 108 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CCSER2Q9H7U1 834 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 MSI1O43347 362 aaKnown RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 MRPS14O60783 128 aaKnown RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ENTPD6O75354 484 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 PPP2R2BQ00005 443 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 PFKPQ01813 784 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 TARDBPQ13148 414 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CHIT1Q13231 466 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 GK3PQ14409 553 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 PRSS48Q7RTY5 328 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SMPD4Q9NXE4 827 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 FLRT1Q9NZU1 646 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 TMEM181Q9P2C4 612 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 DNMT3LQ9UJW3 386 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 EPHX2P34913 555 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF33AQ06730 810 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 AGAP6Q5VW22 663 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 NAPRTQ6XQN6 538 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
SMPD4-202ENST00000409031 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 ZFP90Q8TF47 636 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 AGAP4Q96P64 663 aa17.29■□□□□ 0.36
SMPD4-202ENST00000409031 SORT1Q99523 831 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms