RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MTCH2Q9Y6C9 303 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 IFRD1O00458 451 aaPredicted RBP18.43■□□□□ 0.54
USP39-202ENST00000409025 ACOT8O14734 319 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 SLC16A8O95907 504 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 JUPP14923 745 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 IMPA1P29218 277 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 NFYCQ13952 458 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 SWT1Q5T5J6 900 aaKnown RBP18.43■□□□□ 0.54
USP39-202ENST00000409025 KIAA1211LQ6NV74 962 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 FAM156AQ8NDB6 213 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 BHLHE22Q8NFJ8 381 aaPredicted RBP18.43■□□□□ 0.54
USP39-202ENST00000409025 OR56A3Q8NH54 315 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 LRCH3Q96II8 777 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 ACPTQ9BZG2 426 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 FBRSQ9HAH7 460 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 FBXL12Q9NXK8 326 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 ASIC5Q9NY37 505 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 CIDEBQ9UHD4 219 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 PRORSD1PA6NEY8 169 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 NVLO15381 856 aaKnown RBP18.43■□□□□ 0.54
USP39-202ENST00000409025 DNTTP04053 509 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 JAK1P23458 1154 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 TRAP1Q12931 704 aaKnown RBP18.43■□□□□ 0.54
USP39-202ENST00000409025 NFE2L1Q14494 772 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 TIGD2Q4W5G0 525 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 SLC44A4Q53GD3 710 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 XKR6Q5GH73 641 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 TMEM196Q5HYL7 178 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 ICE2Q659A1 982 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 ZBTB18Q99592 522 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 ACTL8Q9H568 366 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 LRRC42Q9Y546 428 aa18.43■□□□□ 0.54
USP39-202ENST00000409025 TRPM6Q9BX84 2022 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 SERTM1A2A2V5 107 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 ASPDHA6ND91 283 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 CLGNO14967 610 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 ANKRD28O15084 1053 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 PRAMEF4O60810 478 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 RSL1D1O76021 490 aaKnown RBP18.42■□□□□ 0.54
USP39-202ENST00000409025 EGFP01133 1207 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 TLR1Q15399 786 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 MUM1Q2TAK8 710 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 PRAMEF9Q5VWM5 478 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 FRG2Q64ET8 278 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 ZFP1Q6P2D0 407 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 XKR5Q6UX68 686 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 DHDDSQ86SQ9 333 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 LRRTM4Q86VH4 590 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 AMZ2Q86W34 360 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 GALNT13Q8IUC8 556 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 FRG2BQ96QU4 278 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 MKRN2Q9H000 416 aaKnown RBP18.42■□□□□ 0.54
USP39-202ENST00000409025 NMRK1Q9NWW6 199 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 ABCD2Q9UBJ2 740 aa18.42■□□□□ 0.54
USP39-202ENST00000409025 C5orf42Q9H799 3197 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 GRXCR2A6NFK2 248 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 FXYD1O00168 92 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 MAP3K7O43318 606 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 HOXB2P14652 356 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 PRPH2P23942 346 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 TEAD1P28347 426 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 NEK2P51955 445 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 RPS21P63220 83 aaKnown RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 ZNF33BQ06732 778 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 RPA4Q13156 261 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 PON2Q15165 354 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 TAF11Q15544 211 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 PAGE3Q5JUK9 113 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 RALGPS2Q86X27 583 aaPredicted RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 LIX1Q8N485 282 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 IL17RCQ8NAC3 791 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 LGR4Q9BXB1 951 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 TEX101Q9BY14 249 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 MBNL1Q9NR56 388 aaKnown RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 CD207Q9UJ71 328 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 ZFR2Q9UPR6 939 aaKnown RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 PRKAB1Q9Y478 270 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 KLF8O95600 359 aaPredicted RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 STAMBPO95630 424 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 NPPAP01160 153 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 VARSP26640 1264 aaKnown RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 CASP2P42575 452 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 PCDH1Q08174 1060 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 SGCGQ13326 291 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 CAPRIN1Q14444 709 aaKnown RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 INPP5AQ14642 412 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 COL19A1Q14993 1142 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 IRF4Q15306 451 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 UNC5DQ6UXZ4 953 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 OR9A1PQ8NGU1 263 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 OR14C36Q8NHC7 312 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 CMTM7Q96FZ5 175 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 DPY30Q9C005 99 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 WDR26Q9H7D7 661 aa18.41■□□□□ 0.54
USP39-202ENST00000409025 DNMT3AQ9Y6K1 912 aaPredicted RBP18.41■□□□□ 0.54
USP39-202ENST00000409025 E7EQ34 232 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 H3BNX3 289 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 NME4O00746 187 aa18.4■□□□□ 0.54
USP39-202ENST00000409025 PLRG1O43660 514 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms